Protein–RNA interactions for Protein: Q9C0K7

STRADB, STE20-related kinase adapter protein beta, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBQ9C0K7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
STRADBQ9C0K7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
STRADBQ9C0K7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
STRADBQ9C0K7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.34■□□□□ 0.37
STRADBQ9C0K7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
STRADBQ9C0K7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
STRADBQ9C0K7 AC068472.1-201ENST00000474589 881 ntBASIC17.34■□□□□ 0.37
STRADBQ9C0K7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.34■□□□□ 0.37
STRADBQ9C0K7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.34■□□□□ 0.37
STRADBQ9C0K7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.34■□□□□ 0.37
STRADBQ9C0K7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.34■□□□□ 0.37
STRADBQ9C0K7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
STRADBQ9C0K7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
STRADBQ9C0K7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.33■□□□□ 0.37
STRADBQ9C0K7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
STRADBQ9C0K7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.33■□□□□ 0.37
STRADBQ9C0K7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.33■□□□□ 0.37
STRADBQ9C0K7 MYLKP1-201ENST00000509077 1580 ntBASIC17.33■□□□□ 0.37
STRADBQ9C0K7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.33■□□□□ 0.37
STRADBQ9C0K7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
STRADBQ9C0K7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
STRADBQ9C0K7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
STRADBQ9C0K7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
STRADBQ9C0K7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.33■□□□□ 0.36
STRADBQ9C0K7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
STRADBQ9C0K7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.33■□□□□ 0.36
STRADBQ9C0K7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.33■□□□□ 0.36
STRADBQ9C0K7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.33■□□□□ 0.36
STRADBQ9C0K7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.33■□□□□ 0.36
STRADBQ9C0K7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.33■□□□□ 0.36
STRADBQ9C0K7 MTDHP3-201ENST00000594186 672 ntBASIC17.33■□□□□ 0.36
STRADBQ9C0K7 AL671883.3-201ENST00000603274 991 ntBASIC17.33■□□□□ 0.36
STRADBQ9C0K7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.33■□□□□ 0.36
STRADBQ9C0K7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.33■□□□□ 0.36
STRADBQ9C0K7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
STRADBQ9C0K7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
STRADBQ9C0K7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
STRADBQ9C0K7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
STRADBQ9C0K7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
STRADBQ9C0K7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
STRADBQ9C0K7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
STRADBQ9C0K7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
STRADBQ9C0K7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.33■□□□□ 0.36
STRADBQ9C0K7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
STRADBQ9C0K7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
STRADBQ9C0K7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 AC139887.3-201ENST00000568585 713 ntBASIC17.32■□□□□ 0.36
STRADBQ9C0K7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
STRADBQ9C0K7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
STRADBQ9C0K7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
STRADBQ9C0K7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
STRADBQ9C0K7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
STRADBQ9C0K7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
STRADBQ9C0K7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
STRADBQ9C0K7 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.31■□□□□ 0.36
STRADBQ9C0K7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
STRADBQ9C0K7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
STRADBQ9C0K7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
STRADBQ9C0K7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
STRADBQ9C0K7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
STRADBQ9C0K7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
STRADBQ9C0K7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.31■□□□□ 0.36
STRADBQ9C0K7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
STRADBQ9C0K7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.31■□□□□ 0.36
STRADBQ9C0K7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms