Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC12.17□□□□□ -0.46
LITAFQ99732 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LITAFQ99732 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LITAFQ99732 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.17□□□□□ -0.46
LITAFQ99732 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LITAFQ99732 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LITAFQ99732 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LITAFQ99732 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
LITAFQ99732 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LITAFQ99732 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LITAFQ99732 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC12.17□□□□□ -0.46
LITAFQ99732 LSM12P1-201ENST00000411836 588 ntBASIC12.17□□□□□ -0.46
LITAFQ99732 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LITAFQ99732 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LITAFQ99732 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC12.17□□□□□ -0.46
LITAFQ99732 PNN-205ENST00000556530 601 ntTSL 2 BASIC12.17□□□□□ -0.46
LITAFQ99732 AC092437.1-201ENST00000624794 1048 ntBASIC12.17□□□□□ -0.46
LITAFQ99732 HLA-A-209ENST00000638375 975 ntBASIC12.17□□□□□ -0.46
LITAFQ99732 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC12.17□□□□□ -0.46
LITAFQ99732 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LITAFQ99732 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC12.17□□□□□ -0.46
LITAFQ99732 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC12.17□□□□□ -0.46
LITAFQ99732 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LITAFQ99732 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12.17□□□□□ -0.46
LITAFQ99732 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LITAFQ99732 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LITAFQ99732 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LITAFQ99732 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LITAFQ99732 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LITAFQ99732 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LITAFQ99732 MST1L-201ENST00000442552 2185 ntBASIC12.16□□□□□ -0.46
LITAFQ99732 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LITAFQ99732 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LITAFQ99732 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC12.16□□□□□ -0.46
LITAFQ99732 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
LITAFQ99732 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LITAFQ99732 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
LITAFQ99732 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LITAFQ99732 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LITAFQ99732 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC12.16□□□□□ -0.46
LITAFQ99732 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LITAFQ99732 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
LITAFQ99732 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LITAFQ99732 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LITAFQ99732 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC12.16□□□□□ -0.46
LITAFQ99732 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LITAFQ99732 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC12.16□□□□□ -0.46
LITAFQ99732 AL512625.2-201ENST00000417533 625 ntBASIC12.16□□□□□ -0.46
LITAFQ99732 POU5F1P3-201ENST00000428824 1078 ntBASIC12.16□□□□□ -0.46
LITAFQ99732 AC093787.1-201ENST00000450396 207 ntBASIC12.16□□□□□ -0.46
LITAFQ99732 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LITAFQ99732 DBI-210ENST00000542275 757 ntTSL 5 BASIC12.16□□□□□ -0.46
LITAFQ99732 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC12.16□□□□□ -0.46
LITAFQ99732 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC12.16□□□□□ -0.46
LITAFQ99732 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LITAFQ99732 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LITAFQ99732 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.16□□□□□ -0.46
LITAFQ99732 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12.16□□□□□ -0.46
LITAFQ99732 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC12.16□□□□□ -0.46
LITAFQ99732 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
LITAFQ99732 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LITAFQ99732 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LITAFQ99732 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LITAFQ99732 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
LITAFQ99732 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LITAFQ99732 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LITAFQ99732 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC12.16□□□□□ -0.46
LITAFQ99732 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LITAFQ99732 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC12.16□□□□□ -0.46
LITAFQ99732 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.16□□□□□ -0.46
LITAFQ99732 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LITAFQ99732 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LITAFQ99732 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LITAFQ99732 LINC02199-201ENST00000506655 2702 ntBASIC12.16□□□□□ -0.46
LITAFQ99732 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LITAFQ99732 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LITAFQ99732 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
LITAFQ99732 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LITAFQ99732 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
LITAFQ99732 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
LITAFQ99732 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
LITAFQ99732 AC093010.1-201ENST00000473625 1624 ntBASIC12.15□□□□□ -0.46
LITAFQ99732 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
LITAFQ99732 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
LITAFQ99732 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC12.15□□□□□ -0.46
LITAFQ99732 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LITAFQ99732 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC12.15□□□□□ -0.46
LITAFQ99732 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC12.15□□□□□ -0.46
LITAFQ99732 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
LITAFQ99732 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
LITAFQ99732 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC12.15□□□□□ -0.46
LITAFQ99732 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LITAFQ99732 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LITAFQ99732 STX7-201ENST00000367937 1090 ntTSL 5 BASIC12.15□□□□□ -0.46
LITAFQ99732 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC12.15□□□□□ -0.46
LITAFQ99732 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC12.15□□□□□ -0.46
LITAFQ99732 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LITAFQ99732 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
LITAFQ99732 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LITAFQ99732 RGMA-211ENST00000557420 989 ntTSL 3 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms