Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SPENQ96T58 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.42■□□□□ 0.22
SPENQ96T58 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SPENQ96T58 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.42■□□□□ 0.22
SPENQ96T58 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SPENQ96T58 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.42■□□□□ 0.22
SPENQ96T58 AL161938.1-201ENST00000569833 2180 ntBASIC16.42■□□□□ 0.22
SPENQ96T58 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SPENQ96T58 RCN1P2-201ENST00000398357 915 ntBASIC16.42■□□□□ 0.22
SPENQ96T58 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.42■□□□□ 0.22
SPENQ96T58 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.42■□□□□ 0.22
SPENQ96T58 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SPENQ96T58 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SPENQ96T58 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SPENQ96T58 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPENQ96T58 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SPENQ96T58 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPENQ96T58 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.42■□□□□ 0.22
SPENQ96T58 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPENQ96T58 AC148477.5-201ENST00000625164 1645 ntBASIC16.42■□□□□ 0.22
SPENQ96T58 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.42■□□□□ 0.22
SPENQ96T58 HTR5BP-201ENST00000430851 1154 ntBASIC16.42■□□□□ 0.22
SPENQ96T58 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.42■□□□□ 0.22
SPENQ96T58 AC112482.1-201ENST00000492080 688 ntBASIC16.42■□□□□ 0.22
SPENQ96T58 AL356488.2-201ENST00000602755 427 ntBASIC16.42■□□□□ 0.22
SPENQ96T58 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPENQ96T58 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SPENQ96T58 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SPENQ96T58 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
SPENQ96T58 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPENQ96T58 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.41■□□□□ 0.22
SPENQ96T58 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.41■□□□□ 0.22
SPENQ96T58 MTDHP3-201ENST00000594186 672 ntBASIC16.41■□□□□ 0.22
SPENQ96T58 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.41■□□□□ 0.22
SPENQ96T58 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.41■□□□□ 0.22
SPENQ96T58 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SPENQ96T58 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.41■□□□□ 0.22
SPENQ96T58 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.41■□□□□ 0.22
SPENQ96T58 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.41■□□□□ 0.22
SPENQ96T58 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPENQ96T58 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.41■□□□□ 0.22
SPENQ96T58 RBM17P3-201ENST00000417687 1192 ntBASIC16.41■□□□□ 0.22
SPENQ96T58 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.41■□□□□ 0.22
SPENQ96T58 UNC93B6-202ENST00000528242 690 ntBASIC16.41■□□□□ 0.22
SPENQ96T58 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPENQ96T58 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.41■□□□□ 0.22
SPENQ96T58 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SPENQ96T58 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPENQ96T58 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPENQ96T58 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPENQ96T58 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.41■□□□□ 0.22
SPENQ96T58 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPENQ96T58 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPENQ96T58 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPENQ96T58 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPENQ96T58 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPENQ96T58 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.41■□□□□ 0.22
SPENQ96T58 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.41■□□□□ 0.22
SPENQ96T58 AC021087.4-201ENST00000563761 564 ntBASIC16.41■□□□□ 0.22
SPENQ96T58 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPENQ96T58 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPENQ96T58 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPENQ96T58 AL024508.2-201ENST00000607749 1894 ntBASIC16.41■□□□□ 0.22
SPENQ96T58 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.41■□□□□ 0.22
SPENQ96T58 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPENQ96T58 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SPENQ96T58 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SPENQ96T58 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SPENQ96T58 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SPENQ96T58 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPENQ96T58 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPENQ96T58 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SPENQ96T58 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.4■□□□□ 0.22
SPENQ96T58 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPENQ96T58 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SPENQ96T58 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPENQ96T58 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SPENQ96T58 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.4■□□□□ 0.22
SPENQ96T58 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPENQ96T58 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.4■□□□□ 0.22
SPENQ96T58 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.4■□□□□ 0.22
SPENQ96T58 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.4■□□□□ 0.22
SPENQ96T58 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SPENQ96T58 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
SPENQ96T58 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.4■□□□□ 0.22
SPENQ96T58 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.4■□□□□ 0.22
SPENQ96T58 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
SPENQ96T58 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPENQ96T58 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPENQ96T58 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.4■□□□□ 0.22
SPENQ96T58 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPENQ96T58 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.4■□□□□ 0.22
SPENQ96T58 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SPENQ96T58 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SPENQ96T58 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SPENQ96T58 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.39■□□□□ 0.21
SPENQ96T58 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPENQ96T58 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPENQ96T58 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.39■□□□□ 0.21
SPENQ96T58 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms