Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
BBS4Q96RK4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.35■□□□□ 0.37
BBS4Q96RK4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BBS4Q96RK4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
BBS4Q96RK4 MIR149-201ENST00000384879 89 ntBASIC17.35■□□□□ 0.37
BBS4Q96RK4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
BBS4Q96RK4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.35■□□□□ 0.37
BBS4Q96RK4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.35■□□□□ 0.37
BBS4Q96RK4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BBS4Q96RK4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.35■□□□□ 0.37
BBS4Q96RK4 FAM87A-204ENST00000613235 858 ntBASIC17.35■□□□□ 0.37
BBS4Q96RK4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
BBS4Q96RK4 KRT18P22-201ENST00000402024 1347 ntBASIC17.35■□□□□ 0.37
BBS4Q96RK4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BBS4Q96RK4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BBS4Q96RK4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BBS4Q96RK4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.35■□□□□ 0.37
BBS4Q96RK4 AC009102.3-201ENST00000623118 1491 ntBASIC17.35■□□□□ 0.37
BBS4Q96RK4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BBS4Q96RK4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.35■□□□□ 0.37
BBS4Q96RK4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BBS4Q96RK4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
BBS4Q96RK4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BBS4Q96RK4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
BBS4Q96RK4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BBS4Q96RK4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
BBS4Q96RK4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BBS4Q96RK4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BBS4Q96RK4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BBS4Q96RK4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BBS4Q96RK4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BBS4Q96RK4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BBS4Q96RK4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BBS4Q96RK4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BBS4Q96RK4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BBS4Q96RK4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
BBS4Q96RK4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.34■□□□□ 0.37
BBS4Q96RK4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BBS4Q96RK4 AC009947.2-201ENST00000444014 672 ntBASIC17.34■□□□□ 0.37
BBS4Q96RK4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.34■□□□□ 0.37
BBS4Q96RK4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BBS4Q96RK4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.34■□□□□ 0.37
BBS4Q96RK4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BBS4Q96RK4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.34■□□□□ 0.37
BBS4Q96RK4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.34■□□□□ 0.37
BBS4Q96RK4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
BBS4Q96RK4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.34■□□□□ 0.37
BBS4Q96RK4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BBS4Q96RK4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BBS4Q96RK4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
BBS4Q96RK4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BBS4Q96RK4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BBS4Q96RK4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BBS4Q96RK4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
BBS4Q96RK4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.33■□□□□ 0.37
BBS4Q96RK4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BBS4Q96RK4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BBS4Q96RK4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
BBS4Q96RK4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.33■□□□□ 0.37
BBS4Q96RK4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BBS4Q96RK4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BBS4Q96RK4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
BBS4Q96RK4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
BBS4Q96RK4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
BBS4Q96RK4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
BBS4Q96RK4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
BBS4Q96RK4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
BBS4Q96RK4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BBS4Q96RK4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BBS4Q96RK4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BBS4Q96RK4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BBS4Q96RK4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BBS4Q96RK4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BBS4Q96RK4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.33■□□□□ 0.36
BBS4Q96RK4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.33■□□□□ 0.36
BBS4Q96RK4 AC104390.1-201ENST00000555663 520 ntBASIC17.33■□□□□ 0.36
BBS4Q96RK4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.33■□□□□ 0.36
BBS4Q96RK4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.33■□□□□ 0.36
BBS4Q96RK4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.33■□□□□ 0.36
BBS4Q96RK4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
BBS4Q96RK4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
BBS4Q96RK4 AC018470.1-201ENST00000624790 3129 ntBASIC17.33■□□□□ 0.36
BBS4Q96RK4 ESPNP-201ENST00000270691 2015 ntBASIC17.33■□□□□ 0.36
BBS4Q96RK4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BBS4Q96RK4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BBS4Q96RK4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
BBS4Q96RK4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
BBS4Q96RK4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.33■□□□□ 0.36
BBS4Q96RK4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.33■□□□□ 0.36
BBS4Q96RK4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BBS4Q96RK4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BBS4Q96RK4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BBS4Q96RK4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BBS4Q96RK4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BBS4Q96RK4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.32■□□□□ 0.36
BBS4Q96RK4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.32■□□□□ 0.36
BBS4Q96RK4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BBS4Q96RK4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
BBS4Q96RK4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BBS4Q96RK4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms