Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF48Q96MX3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
ZNF48Q96MX3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ZNF48Q96MX3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
ZNF48Q96MX3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.87□□□□□ -0.03
ZNF48Q96MX3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.87□□□□□ -0.03
ZNF48Q96MX3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF48Q96MX3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF48Q96MX3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF48Q96MX3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF48Q96MX3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF48Q96MX3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF48Q96MX3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF48Q96MX3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 KRT8P10-201ENST00000450021 1447 ntBASIC14.86□□□□□ -0.03
ZNF48Q96MX3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 AC090616.6-201ENST00000582640 721 ntBASIC14.86□□□□□ -0.03
ZNF48Q96MX3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 GPR32P1-201ENST00000601788 811 ntBASIC14.86□□□□□ -0.03
ZNF48Q96MX3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 AC120498.9-201ENST00000339021 3867 ntBASIC14.86□□□□□ -0.03
ZNF48Q96MX3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 AL356309.3-201ENST00000624132 1934 ntBASIC14.86□□□□□ -0.03
ZNF48Q96MX3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF48Q96MX3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 IGHGP-201ENST00000390555 1178 ntBASIC14.85□□□□□ -0.03
ZNF48Q96MX3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 AC091304.2-201ENST00000564639 760 ntBASIC14.85□□□□□ -0.03
ZNF48Q96MX3 AC074051.2-201ENST00000565115 352 ntBASIC14.85□□□□□ -0.03
ZNF48Q96MX3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 AL121772.3-201ENST00000610840 674 ntBASIC14.85□□□□□ -0.03
ZNF48Q96MX3 AL031008.1-201ENST00000619963 541 ntBASIC14.85□□□□□ -0.03
ZNF48Q96MX3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
ZNF48Q96MX3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF48Q96MX3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.84□□□□□ -0.03
ZNF48Q96MX3 LINC00167-201ENST00000530583 1419 ntBASIC14.84□□□□□ -0.03
ZNF48Q96MX3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.84□□□□□ -0.03
ZNF48Q96MX3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.84□□□□□ -0.03
ZNF48Q96MX3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
ZNF48Q96MX3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF48Q96MX3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC14.84□□□□□ -0.03
ZNF48Q96MX3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF48Q96MX3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF48Q96MX3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF48Q96MX3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF48Q96MX3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms