Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00479Q96M42 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00479Q96M42 RCC2P3-201ENST00000418112 1537 ntBASIC13.99□□□□□ -0.17
LINC00479Q96M42 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00479Q96M42 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LINC00479Q96M42 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00479Q96M42 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00479Q96M42 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00479Q96M42 NBPF21P-201ENST00000425093 1451 ntBASIC13.99□□□□□ -0.17
LINC00479Q96M42 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00479Q96M42 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00479Q96M42 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00479Q96M42 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00479Q96M42 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 AC006116.8-202ENST00000587620 1550 ntBASIC13.98□□□□□ -0.17
LINC00479Q96M42 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 AC092437.1-201ENST00000624794 1048 ntBASIC13.98□□□□□ -0.17
LINC00479Q96M42 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LINC00479Q96M42 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00479Q96M42 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00479Q96M42 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00479Q96M42 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LINC00479Q96M42 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00479Q96M42 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
LINC00479Q96M42 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC00479Q96M42 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00479Q96M42 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00479Q96M42 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00479Q96M42 HTR7P1-201ENST00000538670 1336 ntBASIC13.97□□□□□ -0.17
LINC00479Q96M42 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00479Q96M42 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00479Q96M42 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00479Q96M42 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00479Q96M42 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LINC00479Q96M42 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00479Q96M42 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00479Q96M42 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC00479Q96M42 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00479Q96M42 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.97□□□□□ -0.17
LINC00479Q96M42 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
LINC00479Q96M42 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00479Q96M42 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.97□□□□□ -0.17
LINC00479Q96M42 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.97□□□□□ -0.17
LINC00479Q96M42 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00479Q96M42 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00479Q96M42 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00479Q96M42 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LINC00479Q96M42 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LINC00479Q96M42 AP001094.4-201ENST00000579008 2176 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms