Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC46Q96FV0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC46Q96FV0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC46Q96FV0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
LRRC46Q96FV0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 TSSC2-201ENST00000450217 709 ntBASIC16.47■□□□□ 0.23
LRRC46Q96FV0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.47■□□□□ 0.23
LRRC46Q96FV0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 TCF3P1-201ENST00000423021 1937 ntBASIC16.47■□□□□ 0.23
LRRC46Q96FV0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.47■□□□□ 0.23
LRRC46Q96FV0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 SDHAP1-207ENST00000440850 2000 ntBASIC16.46■□□□□ 0.23
LRRC46Q96FV0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC46Q96FV0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LRRC46Q96FV0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LRRC46Q96FV0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC46Q96FV0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC46Q96FV0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LRRC46Q96FV0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
LRRC46Q96FV0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
LRRC46Q96FV0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC46Q96FV0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC46Q96FV0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC46Q96FV0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LRRC46Q96FV0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC46Q96FV0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.45■□□□□ 0.22
LRRC46Q96FV0 AC012313.1-201ENST00000593393 3059 ntBASIC16.45■□□□□ 0.22
LRRC46Q96FV0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC46Q96FV0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC46Q96FV0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.45■□□□□ 0.22
LRRC46Q96FV0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC46Q96FV0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC46Q96FV0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC46Q96FV0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC46Q96FV0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC46Q96FV0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC46Q96FV0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC46Q96FV0 AC009065.1-201ENST00000564055 1225 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms