Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBE2E3Q969T4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.59■□□□□ 0.41
UBE2E3Q969T4 AC113347.1-201ENST00000413321 391 ntBASIC17.59■□□□□ 0.41
UBE2E3Q969T4 AL137013.1-201ENST00000432946 1228 ntBASIC17.59■□□□□ 0.41
UBE2E3Q969T4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.59■□□□□ 0.41
UBE2E3Q969T4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.59■□□□□ 0.41
UBE2E3Q969T4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.59■□□□□ 0.41
UBE2E3Q969T4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.59■□□□□ 0.41
UBE2E3Q969T4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.59■□□□□ 0.41
UBE2E3Q969T4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.59■□□□□ 0.41
UBE2E3Q969T4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
UBE2E3Q969T4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBE2E3Q969T4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBE2E3Q969T4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBE2E3Q969T4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBE2E3Q969T4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.59■□□□□ 0.41
UBE2E3Q969T4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBE2E3Q969T4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBE2E3Q969T4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.59■□□□□ 0.41
UBE2E3Q969T4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.58■□□□□ 0.41
UBE2E3Q969T4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBE2E3Q969T4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.58■□□□□ 0.41
UBE2E3Q969T4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.58■□□□□ 0.41
UBE2E3Q969T4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
UBE2E3Q969T4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBE2E3Q969T4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBE2E3Q969T4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2E3Q969T4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 COX11P1-201ENST00000489116 835 ntBASIC17.57■□□□□ 0.4
UBE2E3Q969T4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2E3Q969T4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms