Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RPGRQ92834 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RPGRQ92834 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC22.48■■□□□ 1.19
RPGRQ92834 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RPGRQ92834 RBSN-204ENST00000449050 903 ntTSL 2 BASIC22.48■■□□□ 1.19
RPGRQ92834 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC22.48■■□□□ 1.19
RPGRQ92834 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
RPGRQ92834 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
RPGRQ92834 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RPGRQ92834 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RPGRQ92834 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RPGRQ92834 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RPGRQ92834 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC22.47■■□□□ 1.19
RPGRQ92834 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC22.47■■□□□ 1.19
RPGRQ92834 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPGRQ92834 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPGRQ92834 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPGRQ92834 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RPGRQ92834 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC22.47■■□□□ 1.19
RPGRQ92834 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC22.47■■□□□ 1.19
RPGRQ92834 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPGRQ92834 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC22.47■■□□□ 1.19
RPGRQ92834 SART3-203ENST00000546611 1184 ntBASIC22.47■■□□□ 1.19
RPGRQ92834 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC22.47■■□□□ 1.19
RPGRQ92834 PAM16-208ENST00000573553 722 ntTSL 2 BASIC22.47■■□□□ 1.19
RPGRQ92834 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC22.47■■□□□ 1.19
RPGRQ92834 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.47■■□□□ 1.19
RPGRQ92834 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.47■■□□□ 1.19
RPGRQ92834 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.47■■□□□ 1.19
RPGRQ92834 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPGRQ92834 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPGRQ92834 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPGRQ92834 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPGRQ92834 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPGRQ92834 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RPGRQ92834 ADK-206ENST00000541550 2222 ntTSL 2 BASIC22.46■■□□□ 1.19
RPGRQ92834 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
RPGRQ92834 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RPGRQ92834 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RPGRQ92834 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RPGRQ92834 AFG3L1P-217ENST00000557444 2447 ntBASIC22.46■■□□□ 1.19
RPGRQ92834 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RPGRQ92834 CSF3-203ENST00000394148 622 ntTSL 3 BASIC22.46■■□□□ 1.19
RPGRQ92834 RPS2P1-201ENST00000434010 821 ntBASIC22.46■■□□□ 1.19
RPGRQ92834 ABCD1P5-201ENST00000445663 754 ntBASIC22.46■■□□□ 1.19
RPGRQ92834 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC22.46■■□□□ 1.19
RPGRQ92834 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC22.46■■□□□ 1.19
RPGRQ92834 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC22.46■■□□□ 1.19
RPGRQ92834 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RPGRQ92834 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RPGRQ92834 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RPGRQ92834 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RPGRQ92834 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
RPGRQ92834 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RPGRQ92834 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RPGRQ92834 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RPGRQ92834 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RPGRQ92834 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RPGRQ92834 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC22.45■■□□□ 1.18
RPGRQ92834 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC22.45■■□□□ 1.18
RPGRQ92834 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC22.45■■□□□ 1.18
RPGRQ92834 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC22.45■■□□□ 1.18
RPGRQ92834 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RPGRQ92834 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RPGRQ92834 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RPGRQ92834 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC22.45■■□□□ 1.18
RPGRQ92834 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC22.45■■□□□ 1.18
RPGRQ92834 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RPGRQ92834 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC22.45■■□□□ 1.18
RPGRQ92834 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC22.45■■□□□ 1.18
RPGRQ92834 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RPGRQ92834 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
RPGRQ92834 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RPGRQ92834 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC22.44■■□□□ 1.18
RPGRQ92834 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC22.44■■□□□ 1.18
RPGRQ92834 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RPGRQ92834 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC22.44■■□□□ 1.18
RPGRQ92834 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC22.44■■□□□ 1.18
RPGRQ92834 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RPGRQ92834 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC22.44■■□□□ 1.18
RPGRQ92834 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC22.44■■□□□ 1.18
RPGRQ92834 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RPGRQ92834 AC104109.2-201ENST00000602919 1418 ntBASIC22.44■■□□□ 1.18
RPGRQ92834 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC22.44■■□□□ 1.18
RPGRQ92834 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RPGRQ92834 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RPGRQ92834 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RPGRQ92834 USP39-202ENST00000409025 1946 ntTSL 5 BASIC22.43■■□□□ 1.18
RPGRQ92834 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC22.43■■□□□ 1.18
RPGRQ92834 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RPGRQ92834 HLA-J-201ENST00000462773 1622 ntBASIC22.43■■□□□ 1.18
RPGRQ92834 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.43■■□□□ 1.18
RPGRQ92834 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RPGRQ92834 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RPGRQ92834 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RPGRQ92834 IGHV3-22-201ENST00000520721 359 ntBASIC22.43■■□□□ 1.18
RPGRQ92834 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RPGRQ92834 AC145285.3-201ENST00000564603 959 ntBASIC22.43■■□□□ 1.18
RPGRQ92834 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC22.43■■□□□ 1.18
RPGRQ92834 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms