Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 SOX15-203ENST00000570788 1093 ntBASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 AC080038.1-201ENST00000611274 1154 ntBASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 NBPF21P-201ENST00000425093 1451 ntBASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 AL109659.2-201ENST00000606809 1674 ntBASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CKAP2Q8WWK9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 AC093010.1-201ENST00000473625 1624 ntBASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.15■□□□□ 0.5
CKAP2Q8WWK9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
CKAP2Q8WWK9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CKAP2Q8WWK9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CKAP2Q8WWK9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CKAP2Q8WWK9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CKAP2Q8WWK9 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CKAP2Q8WWK9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CKAP2Q8WWK9 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms