Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RDH11Q8TC12 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RDH11Q8TC12 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RDH11Q8TC12 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RDH11Q8TC12 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.01■□□□□ 0.47
RDH11Q8TC12 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RDH11Q8TC12 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RDH11Q8TC12 FAM197Y1-201ENST00000421178 764 ntBASIC18.01■□□□□ 0.47
RDH11Q8TC12 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.01■□□□□ 0.47
RDH11Q8TC12 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.01■□□□□ 0.47
RDH11Q8TC12 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.01■□□□□ 0.47
RDH11Q8TC12 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.01■□□□□ 0.47
RDH11Q8TC12 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.01■□□□□ 0.47
RDH11Q8TC12 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RDH11Q8TC12 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.01■□□□□ 0.47
RDH11Q8TC12 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RDH11Q8TC12 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RDH11Q8TC12 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RDH11Q8TC12 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RDH11Q8TC12 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RDH11Q8TC12 HTR7P1-202ENST00000624664 4411 ntBASIC18■□□□□ 0.47
RDH11Q8TC12 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RDH11Q8TC12 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18■□□□□ 0.47
RDH11Q8TC12 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RDH11Q8TC12 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RDH11Q8TC12 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18■□□□□ 0.47
RDH11Q8TC12 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18■□□□□ 0.47
RDH11Q8TC12 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RDH11Q8TC12 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RDH11Q8TC12 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RDH11Q8TC12 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18■□□□□ 0.47
RDH11Q8TC12 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RDH11Q8TC12 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
RDH11Q8TC12 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18■□□□□ 0.47
RDH11Q8TC12 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18■□□□□ 0.47
RDH11Q8TC12 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18■□□□□ 0.47
RDH11Q8TC12 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18■□□□□ 0.47
RDH11Q8TC12 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18■□□□□ 0.47
RDH11Q8TC12 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18■□□□□ 0.47
RDH11Q8TC12 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18■□□□□ 0.47
RDH11Q8TC12 CD177P1-201ENST00000606252 935 ntBASIC18■□□□□ 0.47
RDH11Q8TC12 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
RDH11Q8TC12 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RDH11Q8TC12 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18■□□□□ 0.47
RDH11Q8TC12 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
RDH11Q8TC12 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RDH11Q8TC12 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RDH11Q8TC12 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18■□□□□ 0.47
RDH11Q8TC12 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
RDH11Q8TC12 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18■□□□□ 0.47
RDH11Q8TC12 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RDH11Q8TC12 PRORSD1P-202ENST00000563365 2154 ntBASIC18■□□□□ 0.47
RDH11Q8TC12 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RDH11Q8TC12 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RDH11Q8TC12 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
RDH11Q8TC12 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.99■□□□□ 0.47
RDH11Q8TC12 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RDH11Q8TC12 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RDH11Q8TC12 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.99■□□□□ 0.47
RDH11Q8TC12 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RDH11Q8TC12 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RDH11Q8TC12 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RDH11Q8TC12 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RDH11Q8TC12 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RDH11Q8TC12 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RDH11Q8TC12 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.99■□□□□ 0.47
RDH11Q8TC12 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.99■□□□□ 0.47
RDH11Q8TC12 AC009065.1-201ENST00000564055 1225 ntBASIC17.99■□□□□ 0.47
RDH11Q8TC12 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.99■□□□□ 0.47
RDH11Q8TC12 AC066615.1-201ENST00000640911 628 ntBASIC17.99■□□□□ 0.47
RDH11Q8TC12 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RDH11Q8TC12 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RDH11Q8TC12 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RDH11Q8TC12 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RDH11Q8TC12 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.99■□□□□ 0.47
RDH11Q8TC12 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.99■□□□□ 0.47
RDH11Q8TC12 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RDH11Q8TC12 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RDH11Q8TC12 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RDH11Q8TC12 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RDH11Q8TC12 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RDH11Q8TC12 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RDH11Q8TC12 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RDH11Q8TC12 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RDH11Q8TC12 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RDH11Q8TC12 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.98■□□□□ 0.47
RDH11Q8TC12 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RDH11Q8TC12 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RDH11Q8TC12 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RDH11Q8TC12 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RDH11Q8TC12 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RDH11Q8TC12 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RDH11Q8TC12 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RDH11Q8TC12 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RDH11Q8TC12 NUDT16P1-203ENST00000513809 620 ntBASIC17.98■□□□□ 0.47
RDH11Q8TC12 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.98■□□□□ 0.47
RDH11Q8TC12 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.98■□□□□ 0.47
RDH11Q8TC12 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RDH11Q8TC12 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RDH11Q8TC12 FZD10-202ENST00000539839 3282 ntBASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms