Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 RCC2P3-201ENST00000418112 1537 ntBASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 POM121L13P-201ENST00000422362 380 ntBASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 AL645608.8-201ENST00000606034 2086 ntBASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 AP000593.1-201ENST00000393668 712 ntBASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 UNC93B4-201ENST00000505679 747 ntBASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 AC083880.1-201ENST00000608266 535 ntBASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAB3IL1Q8TBN0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
RAB3IL1Q8TBN0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.22■□□□□ 0.51
RAB3IL1Q8TBN0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB3IL1Q8TBN0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.22■□□□□ 0.51
RAB3IL1Q8TBN0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.22■□□□□ 0.51
RAB3IL1Q8TBN0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB3IL1Q8TBN0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAB3IL1Q8TBN0 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAB3IL1Q8TBN0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB3IL1Q8TBN0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB3IL1Q8TBN0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB3IL1Q8TBN0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAB3IL1Q8TBN0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.22■□□□□ 0.51
RAB3IL1Q8TBN0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.22■□□□□ 0.51
RAB3IL1Q8TBN0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.22■□□□□ 0.51
RAB3IL1Q8TBN0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.22■□□□□ 0.51
RAB3IL1Q8TBN0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RAB3IL1Q8TBN0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAB3IL1Q8TBN0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB3IL1Q8TBN0 AL096828.2-201ENST00000567259 1965 ntBASIC18.22■□□□□ 0.51
RAB3IL1Q8TBN0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RAB3IL1Q8TBN0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.22■□□□□ 0.51
RAB3IL1Q8TBN0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms