Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 AP000593.1-201ENST00000393668 712 ntBASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 AC079781.3-201ENST00000449110 356 ntBASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 AC091607.1-201ENST00000490318 1060 ntBASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 AP005901.3-202ENST00000581653 237 ntBASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 AC104692.2-201ENST00000603054 253 ntBASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 AC104581.1-202ENST00000635932 2618 ntBASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SHKBP1Q8TBC3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 LINC01711-201ENST00000598340 967 ntBASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 AC083906.6-201ENST00000641366 219 ntBASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHKBP1Q8TBC3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SHKBP1Q8TBC3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.14■□□□□ 0.66
SHKBP1Q8TBC3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SHKBP1Q8TBC3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SHKBP1Q8TBC3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SHKBP1Q8TBC3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms