Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
USP38Q8NB14 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP38Q8NB14 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP38Q8NB14 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
USP38Q8NB14 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.4■□□□□ 0.86
USP38Q8NB14 AL355385.1-201ENST00000606123 409 ntBASIC20.4■□□□□ 0.86
USP38Q8NB14 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.4■□□□□ 0.86
USP38Q8NB14 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
USP38Q8NB14 AC104581.1-202ENST00000635932 2618 ntBASIC20.4■□□□□ 0.86
USP38Q8NB14 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.4■□□□□ 0.86
USP38Q8NB14 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP38Q8NB14 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP38Q8NB14 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.39■□□□□ 0.86
USP38Q8NB14 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
USP38Q8NB14 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
USP38Q8NB14 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.39■□□□□ 0.86
USP38Q8NB14 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
USP38Q8NB14 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.39■□□□□ 0.86
USP38Q8NB14 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.39■□□□□ 0.86
USP38Q8NB14 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP38Q8NB14 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
USP38Q8NB14 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.39■□□□□ 0.85
USP38Q8NB14 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP38Q8NB14 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.39■□□□□ 0.85
USP38Q8NB14 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
USP38Q8NB14 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.39■□□□□ 0.85
USP38Q8NB14 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP38Q8NB14 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP38Q8NB14 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP38Q8NB14 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.39■□□□□ 0.85
USP38Q8NB14 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
USP38Q8NB14 KRT16P4-201ENST00000453883 522 ntBASIC20.39■□□□□ 0.85
USP38Q8NB14 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.39■□□□□ 0.85
USP38Q8NB14 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP38Q8NB14 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.39■□□□□ 0.85
USP38Q8NB14 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP38Q8NB14 AC009113.1-201ENST00000570267 2443 ntBASIC20.39■□□□□ 0.85
USP38Q8NB14 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.39■□□□□ 0.85
USP38Q8NB14 FP475955.4-201ENST00000623131 1990 ntBASIC20.39■□□□□ 0.85
USP38Q8NB14 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP38Q8NB14 IRX1P1-201ENST00000438849 1838 ntBASIC20.39■□□□□ 0.85
USP38Q8NB14 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
USP38Q8NB14 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP38Q8NB14 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP38Q8NB14 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP38Q8NB14 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.38■□□□□ 0.85
USP38Q8NB14 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP38Q8NB14 AC026471.1-201ENST00000564629 3026 ntBASIC20.38■□□□□ 0.85
USP38Q8NB14 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
USP38Q8NB14 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
USP38Q8NB14 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
USP38Q8NB14 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP38Q8NB14 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.38■□□□□ 0.85
USP38Q8NB14 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP38Q8NB14 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.38■□□□□ 0.85
USP38Q8NB14 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP38Q8NB14 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP38Q8NB14 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
USP38Q8NB14 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP38Q8NB14 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP38Q8NB14 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.38■□□□□ 0.85
USP38Q8NB14 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP38Q8NB14 AP000867.3-201ENST00000524675 377 ntBASIC20.38■□□□□ 0.85
USP38Q8NB14 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.38■□□□□ 0.85
USP38Q8NB14 LINC01711-201ENST00000598340 967 ntBASIC20.38■□□□□ 0.85
USP38Q8NB14 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP38Q8NB14 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP38Q8NB14 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.38■□□□□ 0.85
USP38Q8NB14 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.38■□□□□ 0.85
USP38Q8NB14 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP38Q8NB14 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
USP38Q8NB14 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP38Q8NB14 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP38Q8NB14 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.38■□□□□ 0.85
USP38Q8NB14 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
USP38Q8NB14 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
USP38Q8NB14 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP38Q8NB14 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP38Q8NB14 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP38Q8NB14 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
USP38Q8NB14 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
USP38Q8NB14 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP38Q8NB14 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
USP38Q8NB14 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.37■□□□□ 0.85
USP38Q8NB14 DRAXINP1-201ENST00000437611 948 ntBASIC20.37■□□□□ 0.85
USP38Q8NB14 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.37■□□□□ 0.85
USP38Q8NB14 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
USP38Q8NB14 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
USP38Q8NB14 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.37■□□□□ 0.85
USP38Q8NB14 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
USP38Q8NB14 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.37■□□□□ 0.85
USP38Q8NB14 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.37■□□□□ 0.85
USP38Q8NB14 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
USP38Q8NB14 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP38Q8NB14 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
USP38Q8NB14 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP38Q8NB14 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP38Q8NB14 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP38Q8NB14 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP38Q8NB14 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms