Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC155Q8N6L0 KRT18P1-202ENST00000452408 1331 ntBASIC20.7■□□□□ 0.9
CCDC155Q8N6L0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC155Q8N6L0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC155Q8N6L0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC155Q8N6L0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC155Q8N6L0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 TSPY22P-201ENST00000427496 604 ntBASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 AC079602.3-201ENST00000623931 403 ntBASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC155Q8N6L0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 AL391807.1-203ENST00000604392 2365 ntBASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 WIZP1-201ENST00000531444 2299 ntBASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 MIR662-201ENST00000384847 95 ntBASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 KRT17P6-201ENST00000453795 1220 ntBASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 KRT8P7-201ENST00000533003 1432 ntBASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC155Q8N6L0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC155Q8N6L0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms