Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST3H2BBQ8N257 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.65□□□□□ -0.22
HIST3H2BBQ8N257 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST3H2BBQ8N257 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST3H2BBQ8N257 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST3H2BBQ8N257 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.65□□□□□ -0.22
HIST3H2BBQ8N257 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST3H2BBQ8N257 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.65□□□□□ -0.22
HIST3H2BBQ8N257 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
HIST3H2BBQ8N257 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST3H2BBQ8N257 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST3H2BBQ8N257 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST3H2BBQ8N257 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
HIST3H2BBQ8N257 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 AL356652.1-201ENST00000615962 565 ntBASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 KRT16P2-201ENST00000414673 1423 ntBASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST3H2BBQ8N257 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 HES6-204ENST00000409182 863 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 AC093010.1-201ENST00000473625 1624 ntBASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST3H2BBQ8N257 AC104581.4-201ENST00000623126 3052 ntBASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 AL355312.1-201ENST00000407115 2176 ntBASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms