Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCML4Q8N228 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCML4Q8N228 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SCML4Q8N228 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SCML4Q8N228 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SCML4Q8N228 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCML4Q8N228 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.96■□□□□ 0.63
SCML4Q8N228 AC009113.1-201ENST00000570267 2443 ntBASIC18.96■□□□□ 0.63
SCML4Q8N228 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCML4Q8N228 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCML4Q8N228 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCML4Q8N228 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCML4Q8N228 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCML4Q8N228 LINC00602-201ENST00000629776 2065 ntBASIC18.96■□□□□ 0.63
SCML4Q8N228 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SCML4Q8N228 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCML4Q8N228 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.96■□□□□ 0.63
SCML4Q8N228 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SCML4Q8N228 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
SCML4Q8N228 TSPY12P-201ENST00000421279 868 ntBASIC18.96■□□□□ 0.63
SCML4Q8N228 DRAXINP1-201ENST00000437611 948 ntBASIC18.96■□□□□ 0.63
SCML4Q8N228 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCML4Q8N228 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.96■□□□□ 0.63
SCML4Q8N228 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.96■□□□□ 0.63
SCML4Q8N228 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SCML4Q8N228 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCML4Q8N228 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.96■□□□□ 0.63
SCML4Q8N228 AC135776.1-201ENST00000319817 2481 ntBASIC18.96■□□□□ 0.63
SCML4Q8N228 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
SCML4Q8N228 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.96■□□□□ 0.63
SCML4Q8N228 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCML4Q8N228 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SCML4Q8N228 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCML4Q8N228 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCML4Q8N228 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SCML4Q8N228 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.95■□□□□ 0.62
SCML4Q8N228 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCML4Q8N228 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SCML4Q8N228 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SCML4Q8N228 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.95■□□□□ 0.62
SCML4Q8N228 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCML4Q8N228 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SCML4Q8N228 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCML4Q8N228 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCML4Q8N228 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCML4Q8N228 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.95■□□□□ 0.62
SCML4Q8N228 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.95■□□□□ 0.62
SCML4Q8N228 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SCML4Q8N228 MIR3180-1-201ENST00000580374 94 ntBASIC18.95■□□□□ 0.62
SCML4Q8N228 MIR3180-3-201ENST00000584616 94 ntBASIC18.95■□□□□ 0.62
SCML4Q8N228 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.95■□□□□ 0.62
SCML4Q8N228 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.95■□□□□ 0.62
SCML4Q8N228 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SCML4Q8N228 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SCML4Q8N228 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
SCML4Q8N228 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SCML4Q8N228 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCML4Q8N228 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SCML4Q8N228 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCML4Q8N228 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.94■□□□□ 0.62
SCML4Q8N228 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
SCML4Q8N228 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SCML4Q8N228 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.94■□□□□ 0.62
SCML4Q8N228 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCML4Q8N228 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.94■□□□□ 0.62
SCML4Q8N228 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.94■□□□□ 0.62
SCML4Q8N228 BICD1-207ENST00000551848 1962 ntBASIC18.94■□□□□ 0.62
SCML4Q8N228 AL096828.2-201ENST00000567259 1965 ntBASIC18.94■□□□□ 0.62
SCML4Q8N228 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCML4Q8N228 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCML4Q8N228 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCML4Q8N228 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCML4Q8N228 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SCML4Q8N228 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.94■□□□□ 0.62
SCML4Q8N228 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.94■□□□□ 0.62
SCML4Q8N228 AC068472.1-201ENST00000474589 881 ntBASIC18.94■□□□□ 0.62
SCML4Q8N228 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.94■□□□□ 0.62
SCML4Q8N228 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.94■□□□□ 0.62
SCML4Q8N228 AL592071.1-201ENST00000611956 408 ntBASIC18.94■□□□□ 0.62
SCML4Q8N228 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
SCML4Q8N228 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCML4Q8N228 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.94■□□□□ 0.62
SCML4Q8N228 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.94■□□□□ 0.62
SCML4Q8N228 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.94■□□□□ 0.62
SCML4Q8N228 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SCML4Q8N228 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
SCML4Q8N228 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCML4Q8N228 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SCML4Q8N228 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCML4Q8N228 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCML4Q8N228 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCML4Q8N228 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCML4Q8N228 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.93■□□□□ 0.62
SCML4Q8N228 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SCML4Q8N228 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCML4Q8N228 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.93■□□□□ 0.62
SCML4Q8N228 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCML4Q8N228 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.93■□□□□ 0.62
SCML4Q8N228 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
SCML4Q8N228 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms