Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 AC104390.1-201ENST00000555663 520 ntBASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 AC145285.6-201ENST00000604632 637 ntBASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 AC024243.1-201ENST00000609234 778 ntBASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE9Q8IYJ1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE9Q8IYJ1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CPNE9Q8IYJ1 AC099398.1-201ENST00000567919 2776 ntBASIC18.08■□□□□ 0.49
CPNE9Q8IYJ1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE9Q8IYJ1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE9Q8IYJ1 AC139713.2-201ENST00000641328 2723 ntBASIC18.08■□□□□ 0.49
CPNE9Q8IYJ1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
CPNE9Q8IYJ1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE9Q8IYJ1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CPNE9Q8IYJ1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE9Q8IYJ1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE9Q8IYJ1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.08■□□□□ 0.49
CPNE9Q8IYJ1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE9Q8IYJ1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE9Q8IYJ1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
CPNE9Q8IYJ1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE9Q8IYJ1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.08■□□□□ 0.48
CPNE9Q8IYJ1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CPNE9Q8IYJ1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.08■□□□□ 0.48
CPNE9Q8IYJ1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.08■□□□□ 0.48
CPNE9Q8IYJ1 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.08■□□□□ 0.48
CPNE9Q8IYJ1 AL512604.3-201ENST00000569583 964 ntBASIC18.08■□□□□ 0.48
CPNE9Q8IYJ1 AC010240.3-201ENST00000607688 395 ntBASIC18.08■□□□□ 0.48
CPNE9Q8IYJ1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CPNE9Q8IYJ1 AC020916.1-201ENST00000587762 1774 ntBASIC18.08■□□□□ 0.48
CPNE9Q8IYJ1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE9Q8IYJ1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.08■□□□□ 0.48
CPNE9Q8IYJ1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CPNE9Q8IYJ1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.08■□□□□ 0.48
CPNE9Q8IYJ1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE9Q8IYJ1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE9Q8IYJ1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE9Q8IYJ1 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.07■□□□□ 0.48
CPNE9Q8IYJ1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CPNE9Q8IYJ1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CPNE9Q8IYJ1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CPNE9Q8IYJ1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE9Q8IYJ1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE9Q8IYJ1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE9Q8IYJ1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms