Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 POM121L3P-201ENST00000419331 1163 ntBASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 AC004967.1-201ENST00000453589 447 ntBASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 GPR32P1-201ENST00000601788 811 ntBASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 AL032819.2-201ENST00000624543 2162 ntBASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 AC006333.2-201ENST00000607957 2099 ntBASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RP1L1Q8IWN7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 AC096582.2-201ENST00000510860 516 ntBASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 TEX21P-204ENST00000641479 1693 ntBASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RP1L1Q8IWN7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 IRX1P1-201ENST00000438849 1838 ntBASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 LINC01521-201ENST00000504184 1943 ntBASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RP1L1Q8IWN7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.52■□□□□ 0.24
RP1L1Q8IWN7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RP1L1Q8IWN7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.52■□□□□ 0.24
RP1L1Q8IWN7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RP1L1Q8IWN7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RP1L1Q8IWN7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RP1L1Q8IWN7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RP1L1Q8IWN7 MIR3180-4-201ENST00000582223 153 ntBASIC16.52■□□□□ 0.24
RP1L1Q8IWN7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.52■□□□□ 0.24
RP1L1Q8IWN7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.52■□□□□ 0.24
RP1L1Q8IWN7 AC134684.3-201ENST00000641758 218 ntBASIC16.52■□□□□ 0.24
RP1L1Q8IWN7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RP1L1Q8IWN7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.52■□□□□ 0.24
RP1L1Q8IWN7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RP1L1Q8IWN7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RP1L1Q8IWN7 AP005117.1-201ENST00000584346 1413 ntBASIC16.52■□□□□ 0.24
RP1L1Q8IWN7 HLA-J-201ENST00000462773 1622 ntBASIC16.52■□□□□ 0.24
RP1L1Q8IWN7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RP1L1Q8IWN7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
RP1L1Q8IWN7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RP1L1Q8IWN7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms