Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 AL096828.2-201ENST00000567259 1965 ntBASIC18.9■□□□□ 0.62
CCDC25Q86WR0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC25Q86WR0 FLJ13224-201ENST00000313737 1514 ntBASIC18.9■□□□□ 0.62
CCDC25Q86WR0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC25Q86WR0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CCDC25Q86WR0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC25Q86WR0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CCDC25Q86WR0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC25Q86WR0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CCDC25Q86WR0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC25Q86WR0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
CCDC25Q86WR0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC25Q86WR0 RNA5SP413-201ENST00000516373 109 ntBASIC18.89■□□□□ 0.61
CCDC25Q86WR0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC25Q86WR0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC25Q86WR0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CCDC25Q86WR0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC25Q86WR0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC25Q86WR0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC25Q86WR0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC25Q86WR0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 AC012317.2-201ENST00000623305 2251 ntBASIC18.88■□□□□ 0.61
CCDC25Q86WR0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 NIFKP9-201ENST00000419265 221 ntBASIC18.88■□□□□ 0.61
CCDC25Q86WR0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC25Q86WR0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms