Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
USP48Q86UV5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
USP48Q86UV5 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC22.38■■□□□ 1.17
USP48Q86UV5 BAALC-202ENST00000306391 243 ntTSL 5 BASIC22.38■■□□□ 1.17
USP48Q86UV5 BAALC-204ENST00000330955 222 ntTSL 5 BASIC22.38■■□□□ 1.17
USP48Q86UV5 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
USP48Q86UV5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
USP48Q86UV5 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC22.38■■□□□ 1.17
USP48Q86UV5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC22.38■■□□□ 1.17
USP48Q86UV5 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC22.38■■□□□ 1.17
USP48Q86UV5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC22.38■■□□□ 1.17
USP48Q86UV5 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
USP48Q86UV5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
USP48Q86UV5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
USP48Q86UV5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
USP48Q86UV5 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
USP48Q86UV5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC22.38■■□□□ 1.17
USP48Q86UV5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
USP48Q86UV5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
USP48Q86UV5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC22.38■■□□□ 1.17
USP48Q86UV5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
USP48Q86UV5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
USP48Q86UV5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
USP48Q86UV5 IL9RP2-201ENST00000423948 1312 ntBASIC22.37■■□□□ 1.17
USP48Q86UV5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
USP48Q86UV5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
USP48Q86UV5 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC22.37■■□□□ 1.17
USP48Q86UV5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC22.37■■□□□ 1.17
USP48Q86UV5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
USP48Q86UV5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC22.37■■□□□ 1.17
USP48Q86UV5 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
USP48Q86UV5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC22.37■■□□□ 1.17
USP48Q86UV5 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC22.37■■□□□ 1.17
USP48Q86UV5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
USP48Q86UV5 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC22.37■■□□□ 1.17
USP48Q86UV5 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC22.37■■□□□ 1.17
USP48Q86UV5 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC22.37■■□□□ 1.17
USP48Q86UV5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC22.37■■□□□ 1.17
USP48Q86UV5 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC22.37■■□□□ 1.17
USP48Q86UV5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC22.37■■□□□ 1.17
USP48Q86UV5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC22.37■■□□□ 1.17
USP48Q86UV5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
USP48Q86UV5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
USP48Q86UV5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
USP48Q86UV5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
USP48Q86UV5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
USP48Q86UV5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC22.37■■□□□ 1.17
USP48Q86UV5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC22.37■■□□□ 1.17
USP48Q86UV5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
USP48Q86UV5 ZNF815P-204ENST00000434898 1737 ntBASIC22.37■■□□□ 1.17
USP48Q86UV5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
USP48Q86UV5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
USP48Q86UV5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
USP48Q86UV5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
USP48Q86UV5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
USP48Q86UV5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC22.36■■□□□ 1.17
USP48Q86UV5 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
USP48Q86UV5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC22.36■■□□□ 1.17
USP48Q86UV5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
USP48Q86UV5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
USP48Q86UV5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
USP48Q86UV5 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC22.36■■□□□ 1.17
USP48Q86UV5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC22.36■■□□□ 1.17
USP48Q86UV5 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
USP48Q86UV5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC22.36■■□□□ 1.17
USP48Q86UV5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
USP48Q86UV5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
USP48Q86UV5 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
USP48Q86UV5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC22.36■■□□□ 1.17
USP48Q86UV5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
USP48Q86UV5 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
USP48Q86UV5 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC22.35■■□□□ 1.17
USP48Q86UV5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USP48Q86UV5 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
USP48Q86UV5 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
USP48Q86UV5 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
USP48Q86UV5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USP48Q86UV5 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USP48Q86UV5 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USP48Q86UV5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USP48Q86UV5 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USP48Q86UV5 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC22.35■■□□□ 1.17
USP48Q86UV5 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC22.35■■□□□ 1.17
USP48Q86UV5 AF238378.1-201ENST00000526806 358 ntBASIC22.35■■□□□ 1.17
USP48Q86UV5 SLC25A1P1-201ENST00000528351 927 ntBASIC22.35■■□□□ 1.17
USP48Q86UV5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC22.35■■□□□ 1.17
USP48Q86UV5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC22.35■■□□□ 1.17
USP48Q86UV5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USP48Q86UV5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
USP48Q86UV5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
USP48Q86UV5 LETM1P2-201ENST00000597330 2178 ntBASIC22.35■■□□□ 1.17
USP48Q86UV5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USP48Q86UV5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC22.34■■□□□ 1.17
USP48Q86UV5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
USP48Q86UV5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
USP48Q86UV5 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC22.34■■□□□ 1.17
USP48Q86UV5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC22.34■■□□□ 1.17
USP48Q86UV5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
USP48Q86UV5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
USP48Q86UV5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms