Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
RGPD4Q7Z3J3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
RGPD4Q7Z3J3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC23.05■■□□□ 1.28
RGPD4Q7Z3J3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC23.05■■□□□ 1.28
RGPD4Q7Z3J3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
RGPD4Q7Z3J3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RGPD4Q7Z3J3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.05■■□□□ 1.28
RGPD4Q7Z3J3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RGPD4Q7Z3J3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RGPD4Q7Z3J3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.05■■□□□ 1.28
RGPD4Q7Z3J3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RGPD4Q7Z3J3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RGPD4Q7Z3J3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RGPD4Q7Z3J3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC23.04■■□□□ 1.28
RGPD4Q7Z3J3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC23.04■■□□□ 1.28
RGPD4Q7Z3J3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC23.04■■□□□ 1.28
RGPD4Q7Z3J3 AC109322.1-201ENST00000524499 1264 ntBASIC23.04■■□□□ 1.28
RGPD4Q7Z3J3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC23.04■■□□□ 1.28
RGPD4Q7Z3J3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC23.04■■□□□ 1.28
RGPD4Q7Z3J3 AF228730.6-201ENST00000641497 218 ntBASIC23.04■■□□□ 1.28
RGPD4Q7Z3J3 AC084121.3-201ENST00000641716 218 ntBASIC23.04■■□□□ 1.28
RGPD4Q7Z3J3 AC105233.6-201ENST00000642093 218 ntBASIC23.04■■□□□ 1.28
RGPD4Q7Z3J3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.04■■□□□ 1.28
RGPD4Q7Z3J3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RGPD4Q7Z3J3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
RGPD4Q7Z3J3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RGPD4Q7Z3J3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC23.04■■□□□ 1.28
RGPD4Q7Z3J3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC23.04■■□□□ 1.28
RGPD4Q7Z3J3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC23.04■■□□□ 1.28
RGPD4Q7Z3J3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC23.04■■□□□ 1.28
RGPD4Q7Z3J3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC23.04■■□□□ 1.28
RGPD4Q7Z3J3 AC004706.3-202ENST00000621574 984 ntBASIC23.04■■□□□ 1.28
RGPD4Q7Z3J3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RGPD4Q7Z3J3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.03■■□□□ 1.28
RGPD4Q7Z3J3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.03■■□□□ 1.28
RGPD4Q7Z3J3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RGPD4Q7Z3J3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC23.03■■□□□ 1.28
RGPD4Q7Z3J3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RGPD4Q7Z3J3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC23.03■■□□□ 1.28
RGPD4Q7Z3J3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RGPD4Q7Z3J3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC23.03■■□□□ 1.28
RGPD4Q7Z3J3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC23.03■■□□□ 1.28
RGPD4Q7Z3J3 KRT19P2-202ENST00000557173 1012 ntBASIC23.03■■□□□ 1.28
RGPD4Q7Z3J3 AC015911.4-201ENST00000588022 1070 ntBASIC23.03■■□□□ 1.28
RGPD4Q7Z3J3 AC009093.7-201ENST00000623853 1223 ntBASIC23.03■■□□□ 1.28
RGPD4Q7Z3J3 AL805961.1-202ENST00000641562 540 ntBASIC23.03■■□□□ 1.28
RGPD4Q7Z3J3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.03■■□□□ 1.28
RGPD4Q7Z3J3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RGPD4Q7Z3J3 AC006504.4-201ENST00000592118 1568 ntBASIC23.03■■□□□ 1.28
RGPD4Q7Z3J3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RGPD4Q7Z3J3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC23.03■■□□□ 1.28
RGPD4Q7Z3J3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RGPD4Q7Z3J3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC23.02■■□□□ 1.28
RGPD4Q7Z3J3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
RGPD4Q7Z3J3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC23.02■■□□□ 1.28
RGPD4Q7Z3J3 AC005034.1-201ENST00000426657 489 ntBASIC23.02■■□□□ 1.28
RGPD4Q7Z3J3 AC122714.2-201ENST00000502787 707 ntBASIC23.02■■□□□ 1.28
RGPD4Q7Z3J3 AC005225.4-201ENST00000557330 545 ntBASIC23.02■■□□□ 1.28
RGPD4Q7Z3J3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RGPD4Q7Z3J3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RGPD4Q7Z3J3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RGPD4Q7Z3J3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
RGPD4Q7Z3J3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RGPD4Q7Z3J3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC23.02■■□□□ 1.28
RGPD4Q7Z3J3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC23.01■■□□□ 1.27
RGPD4Q7Z3J3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC23.01■■□□□ 1.27
RGPD4Q7Z3J3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC23.01■■□□□ 1.27
RGPD4Q7Z3J3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
RGPD4Q7Z3J3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC23.01■■□□□ 1.27
RGPD4Q7Z3J3 AC091812.2-201ENST00000619081 385 ntBASIC23.01■■□□□ 1.27
RGPD4Q7Z3J3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RGPD4Q7Z3J3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC23.01■■□□□ 1.27
RGPD4Q7Z3J3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RGPD4Q7Z3J3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RGPD4Q7Z3J3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RGPD4Q7Z3J3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC23.01■■□□□ 1.27
RGPD4Q7Z3J3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RGPD4Q7Z3J3 BAD-202ENST00000394531 631 ntTSL 3 BASIC23.01■■□□□ 1.27
RGPD4Q7Z3J3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
RGPD4Q7Z3J3 FAM58CP-201ENST00000435741 640 ntBASIC23.01■■□□□ 1.27
RGPD4Q7Z3J3 IGHV3-65-201ENST00000523210 341 ntBASIC23.01■■□□□ 1.27
RGPD4Q7Z3J3 MIR4745-201ENST00000577608 62 ntBASIC23.01■■□□□ 1.27
RGPD4Q7Z3J3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RGPD4Q7Z3J3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RGPD4Q7Z3J3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
RGPD4Q7Z3J3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RGPD4Q7Z3J3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23■■□□□ 1.27
RGPD4Q7Z3J3 SDHAP2-201ENST00000455183 2001 ntBASIC23■■□□□ 1.27
RGPD4Q7Z3J3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RGPD4Q7Z3J3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
RGPD4Q7Z3J3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC23■■□□□ 1.27
RGPD4Q7Z3J3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC23■■□□□ 1.27
RGPD4Q7Z3J3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC23■■□□□ 1.27
RGPD4Q7Z3J3 AL353135.1-201ENST00000606729 504 ntBASIC23■■□□□ 1.27
RGPD4Q7Z3J3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC23■■□□□ 1.27
RGPD4Q7Z3J3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC23■■□□□ 1.27
RGPD4Q7Z3J3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC23■■□□□ 1.27
RGPD4Q7Z3J3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RGPD4Q7Z3J3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC23■■□□□ 1.27
RGPD4Q7Z3J3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms