Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 AC009102.3-201ENST00000623118 1491 ntBASIC22.38■■□□□ 1.17
CASC1Q6TDU7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CASC1Q6TDU7 AC008764.6-201ENST00000595909 2069 ntBASIC22.38■■□□□ 1.17
CASC1Q6TDU7 HOXB1-202ENST00000577092 1414 ntBASIC22.38■■□□□ 1.17
CASC1Q6TDU7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CASC1Q6TDU7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CASC1Q6TDU7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CASC1Q6TDU7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CASC1Q6TDU7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC22.37■■□□□ 1.17
CASC1Q6TDU7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CASC1Q6TDU7 AL163051.1-201ENST00000569214 1512 ntBASIC22.37■■□□□ 1.17
CASC1Q6TDU7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CASC1Q6TDU7 MIR149-201ENST00000384879 89 ntBASIC22.37■■□□□ 1.17
CASC1Q6TDU7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CASC1Q6TDU7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC22.37■■□□□ 1.17
CASC1Q6TDU7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC22.37■■□□□ 1.17
CASC1Q6TDU7 AP003041.3-201ENST00000527151 707 ntBASIC22.37■■□□□ 1.17
CASC1Q6TDU7 AL353719.1-201ENST00000566847 864 ntBASIC22.37■■□□□ 1.17
CASC1Q6TDU7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC22.37■■□□□ 1.17
CASC1Q6TDU7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC22.37■■□□□ 1.17
CASC1Q6TDU7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CASC1Q6TDU7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC22.37■■□□□ 1.17
CASC1Q6TDU7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
CASC1Q6TDU7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CASC1Q6TDU7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CASC1Q6TDU7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CASC1Q6TDU7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CASC1Q6TDU7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CASC1Q6TDU7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
CASC1Q6TDU7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
CASC1Q6TDU7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 HIST1H2APS4-201ENST00000362070 348 ntBASIC22.36■■□□□ 1.17
CASC1Q6TDU7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 KRT18P23-201ENST00000435622 1283 ntBASIC22.36■■□□□ 1.17
CASC1Q6TDU7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 AC009065.1-201ENST00000564055 1225 ntBASIC22.36■■□□□ 1.17
CASC1Q6TDU7 AL023803.3-201ENST00000615559 522 ntBASIC22.36■■□□□ 1.17
CASC1Q6TDU7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC22.36■■□□□ 1.17
CASC1Q6TDU7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CASC1Q6TDU7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CASC1Q6TDU7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CASC1Q6TDU7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CASC1Q6TDU7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC22.35■■□□□ 1.17
CASC1Q6TDU7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC22.35■■□□□ 1.17
CASC1Q6TDU7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CASC1Q6TDU7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CASC1Q6TDU7 SLC25A6P5-201ENST00000435663 894 ntBASIC22.35■■□□□ 1.17
CASC1Q6TDU7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC22.35■■□□□ 1.17
CASC1Q6TDU7 AP000525.1-201ENST00000608286 694 ntBASIC22.35■■□□□ 1.17
CASC1Q6TDU7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CASC1Q6TDU7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
CASC1Q6TDU7 FLJ13224-201ENST00000313737 1514 ntBASIC22.35■■□□□ 1.17
CASC1Q6TDU7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CASC1Q6TDU7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC22.35■■□□□ 1.17
CASC1Q6TDU7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC22.34■■□□□ 1.17
CASC1Q6TDU7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC22.34■■□□□ 1.17
CASC1Q6TDU7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
CASC1Q6TDU7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
CASC1Q6TDU7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CASC1Q6TDU7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
CASC1Q6TDU7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC22.34■■□□□ 1.17
CASC1Q6TDU7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
CASC1Q6TDU7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.34■■□□□ 1.17
CASC1Q6TDU7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC22.34■■□□□ 1.17
CASC1Q6TDU7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC22.34■■□□□ 1.17
CASC1Q6TDU7 BX088651.1-201ENST00000540551 451 ntBASIC22.34■■□□□ 1.17
CASC1Q6TDU7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC22.34■■□□□ 1.17
CASC1Q6TDU7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CASC1Q6TDU7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC22.34■■□□□ 1.17
CASC1Q6TDU7 PCDHB18P-201ENST00000524813 2368 ntBASIC22.34■■□□□ 1.17
CASC1Q6TDU7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CASC1Q6TDU7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms