Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.61■□□□□ 0.73
CNKSR3Q6P9H4 NKAPP1-205ENST00000585790 367 ntBASIC19.61■□□□□ 0.73
CNKSR3Q6P9H4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.61■□□□□ 0.73
CNKSR3Q6P9H4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNKSR3Q6P9H4 AC107918.4-202ENST00000641623 219 ntBASIC19.61■□□□□ 0.73
CNKSR3Q6P9H4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNKSR3Q6P9H4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNKSR3Q6P9H4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNKSR3Q6P9H4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNKSR3Q6P9H4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNKSR3Q6P9H4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.6■□□□□ 0.73
CNKSR3Q6P9H4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CNKSR3Q6P9H4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNKSR3Q6P9H4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CNKSR3Q6P9H4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNKSR3Q6P9H4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNKSR3Q6P9H4 DNAJB3-201ENST00000446806 729 ntBASIC19.6■□□□□ 0.73
CNKSR3Q6P9H4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.6■□□□□ 0.73
CNKSR3Q6P9H4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNKSR3Q6P9H4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.6■□□□□ 0.73
CNKSR3Q6P9H4 MIR3687-2-201ENST00000577708 61 ntBASIC19.6■□□□□ 0.73
CNKSR3Q6P9H4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNKSR3Q6P9H4 MIR3687-1-201ENST00000614492 61 ntBASIC19.6■□□□□ 0.73
CNKSR3Q6P9H4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNKSR3Q6P9H4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CNKSR3Q6P9H4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CNKSR3Q6P9H4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.6■□□□□ 0.73
CNKSR3Q6P9H4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.6■□□□□ 0.73
CNKSR3Q6P9H4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNKSR3Q6P9H4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.6■□□□□ 0.73
CNKSR3Q6P9H4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 AL161938.1-201ENST00000569833 2180 ntBASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 AC112698.1-201ENST00000510299 916 ntBASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 UNC93B6-202ENST00000528242 690 ntBASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 AP001160.2-201ENST00000596071 487 ntBASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 AC093484.2-201ENST00000580996 2166 ntBASIC19.59■□□□□ 0.73
CNKSR3Q6P9H4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CNKSR3Q6P9H4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNKSR3Q6P9H4 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.58■□□□□ 0.73
CNKSR3Q6P9H4 LINC01126-201ENST00000623515 1646 ntBASIC19.58■□□□□ 0.73
CNKSR3Q6P9H4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.58■□□□□ 0.73
CNKSR3Q6P9H4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNKSR3Q6P9H4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNKSR3Q6P9H4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CNKSR3Q6P9H4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNKSR3Q6P9H4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CNKSR3Q6P9H4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.58■□□□□ 0.73
CNKSR3Q6P9H4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.58■□□□□ 0.72
CNKSR3Q6P9H4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.58■□□□□ 0.72
CNKSR3Q6P9H4 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.58■□□□□ 0.72
CNKSR3Q6P9H4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.58■□□□□ 0.72
CNKSR3Q6P9H4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.58■□□□□ 0.72
CNKSR3Q6P9H4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.58■□□□□ 0.72
CNKSR3Q6P9H4 RNA5SP416-201ENST00000516838 111 ntBASIC19.58■□□□□ 0.72
CNKSR3Q6P9H4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.58■□□□□ 0.72
CNKSR3Q6P9H4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.72
CNKSR3Q6P9H4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.58■□□□□ 0.72
CNKSR3Q6P9H4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.58■□□□□ 0.72
CNKSR3Q6P9H4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNKSR3Q6P9H4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CNKSR3Q6P9H4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CNKSR3Q6P9H4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNKSR3Q6P9H4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.58■□□□□ 0.72
CNKSR3Q6P9H4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CNKSR3Q6P9H4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CNKSR3Q6P9H4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CNKSR3Q6P9H4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms