Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 PP12613-201ENST00000424958 2230 ntBASIC17.64■□□□□ 0.41
RNF220Q5VTB9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 KRASP1-201ENST00000407852 552 ntBASIC17.63■□□□□ 0.41
RNF220Q5VTB9 KRT16P5-201ENST00000455284 522 ntBASIC17.63■□□□□ 0.41
RNF220Q5VTB9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 FEM1AP3-201ENST00000403722 1741 ntBASIC17.63■□□□□ 0.41
RNF220Q5VTB9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF220Q5VTB9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 LINC00554-201ENST00000564841 3011 ntBASIC17.62■□□□□ 0.41
RNF220Q5VTB9 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 AC133681.1-201ENST00000465482 601 ntBASIC17.62■□□□□ 0.41
RNF220Q5VTB9 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 AL023875.1-201ENST00000640777 796 ntBASIC17.62■□□□□ 0.41
RNF220Q5VTB9 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF220Q5VTB9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms