Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.66■□□□□ 0.42
RIF1Q5UIP0 INGX-202ENST00000489074 768 ntBASIC17.66■□□□□ 0.42
RIF1Q5UIP0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.66■□□□□ 0.42
RIF1Q5UIP0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.66■□□□□ 0.42
RIF1Q5UIP0 MIR6799-201ENST00000620297 69 ntBASIC17.66■□□□□ 0.42
RIF1Q5UIP0 AC005593.1-201ENST00000624894 515 ntBASIC17.66■□□□□ 0.42
RIF1Q5UIP0 AL022326.1-202ENST00000641533 845 ntBASIC17.66■□□□□ 0.42
RIF1Q5UIP0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIF1Q5UIP0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RIF1Q5UIP0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RIF1Q5UIP0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIF1Q5UIP0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIF1Q5UIP0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RIF1Q5UIP0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.66■□□□□ 0.42
RIF1Q5UIP0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RIF1Q5UIP0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIF1Q5UIP0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RIF1Q5UIP0 FAM86GP-201ENST00000448322 971 ntBASIC17.66■□□□□ 0.42
RIF1Q5UIP0 PRYP5-201ENST00000451909 266 ntBASIC17.66■□□□□ 0.42
RIF1Q5UIP0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.66■□□□□ 0.42
RIF1Q5UIP0 AC051619.7-201ENST00000568314 623 ntBASIC17.66■□□□□ 0.42
RIF1Q5UIP0 AC027307.3-201ENST00000594262 1100 ntBASIC17.66■□□□□ 0.42
RIF1Q5UIP0 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.66■□□□□ 0.42
RIF1Q5UIP0 AL353135.1-201ENST00000606729 504 ntBASIC17.66■□□□□ 0.42
RIF1Q5UIP0 AC008761.3-201ENST00000624803 892 ntBASIC17.66■□□□□ 0.42
RIF1Q5UIP0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.66■□□□□ 0.42
RIF1Q5UIP0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RIF1Q5UIP0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIF1Q5UIP0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 AC025048.6-201ENST00000634326 1161 ntBASIC17.65■□□□□ 0.42
RIF1Q5UIP0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 AC006504.4-201ENST00000592118 1568 ntBASIC17.65■□□□□ 0.42
RIF1Q5UIP0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 KRT18P41-201ENST00000518924 1277 ntBASIC17.65■□□□□ 0.42
RIF1Q5UIP0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIF1Q5UIP0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.64■□□□□ 0.42
RIF1Q5UIP0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.64■□□□□ 0.42
RIF1Q5UIP0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RIF1Q5UIP0 ELK2BP-201ENST00000415014 1224 ntBASIC17.64■□□□□ 0.42
RIF1Q5UIP0 AC067863.1-201ENST00000494933 530 ntBASIC17.64■□□□□ 0.42
RIF1Q5UIP0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.64■□□□□ 0.42
RIF1Q5UIP0 AC073592.4-201ENST00000623827 446 ntBASIC17.64■□□□□ 0.42
RIF1Q5UIP0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RIF1Q5UIP0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RIF1Q5UIP0 AC079776.2-201ENST00000641154 1609 ntBASIC17.64■□□□□ 0.41
RIF1Q5UIP0 KRT8P32-201ENST00000512863 1461 ntBASIC17.64■□□□□ 0.41
RIF1Q5UIP0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RIF1Q5UIP0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RIF1Q5UIP0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.64■□□□□ 0.41
RIF1Q5UIP0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RIF1Q5UIP0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.64■□□□□ 0.41
RIF1Q5UIP0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RIF1Q5UIP0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
RIF1Q5UIP0 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RIF1Q5UIP0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
RIF1Q5UIP0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RIF1Q5UIP0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RIF1Q5UIP0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.64■□□□□ 0.41
RIF1Q5UIP0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RIF1Q5UIP0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RIF1Q5UIP0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RIF1Q5UIP0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.64■□□□□ 0.41
RIF1Q5UIP0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RIF1Q5UIP0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RIF1Q5UIP0 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RIF1Q5UIP0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RIF1Q5UIP0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RIF1Q5UIP0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RIF1Q5UIP0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RIF1Q5UIP0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms