Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 AC004832.2-201ENST00000426397 482 ntBASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 AL031432.2-201ENST00000566714 459 ntBASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 AL928711.1-201ENST00000570165 459 ntBASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13DQ5THJ4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 DNAJB3-201ENST00000446806 729 ntBASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 KRT18P65-201ENST00000439811 1286 ntBASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13DQ5THJ4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms