Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC20.42■□□□□ 0.86
COL13A1Q5TAT6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.42■□□□□ 0.86
COL13A1Q5TAT6 AC010654.1-201ENST00000615722 808 ntBASIC20.42■□□□□ 0.86
COL13A1Q5TAT6 IGHV3-72-202ENST00000621503 303 ntBASIC20.42■□□□□ 0.86
COL13A1Q5TAT6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL13A1Q5TAT6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
COL13A1Q5TAT6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL13A1Q5TAT6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL13A1Q5TAT6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL13A1Q5TAT6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.42■□□□□ 0.86
COL13A1Q5TAT6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 RPS15P9-201ENST00000494093 319 ntBASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 IGHV3OR16-16-201ENST00000563644 343 ntBASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 AC009118.2-201ENST00000613275 655 ntBASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 AP001059.3-201ENST00000619053 235 ntBASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL13A1Q5TAT6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 AC138969.3-201ENST00000546612 1459 ntBASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 AC138932.2-201ENST00000548268 1459 ntBASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 AC126755.4-201ENST00000549796 1459 ntBASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 ARL16-210ENST00000574938 751 ntTSL 2 BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 AC092720.2-201ENST00000602388 1665 ntBASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 AC023141.13-201ENST00000604991 943 ntBASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 AC073592.4-201ENST00000623827 446 ntBASIC20.4■□□□□ 0.86
COL13A1Q5TAT6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
COL13A1Q5TAT6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL13A1Q5TAT6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL13A1Q5TAT6 AL512353.2-201ENST00000448759 1962 ntBASIC20.39■□□□□ 0.86
COL13A1Q5TAT6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL13A1Q5TAT6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL13A1Q5TAT6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL13A1Q5TAT6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.39■□□□□ 0.86
COL13A1Q5TAT6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL13A1Q5TAT6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL13A1Q5TAT6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.39■□□□□ 0.85
COL13A1Q5TAT6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL13A1Q5TAT6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL13A1Q5TAT6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
COL13A1Q5TAT6 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.39■□□□□ 0.85
COL13A1Q5TAT6 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL13A1Q5TAT6 MRPS18AP1-201ENST00000414458 589 ntBASIC20.39■□□□□ 0.85
COL13A1Q5TAT6 ADH5P3-201ENST00000433842 1137 ntBASIC20.39■□□□□ 0.85
COL13A1Q5TAT6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL13A1Q5TAT6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.39■□□□□ 0.85
COL13A1Q5TAT6 AC097493.3-201ENST00000509725 367 ntBASIC20.39■□□□□ 0.85
COL13A1Q5TAT6 AC007064.4-201ENST00000637740 555 ntBASIC20.39■□□□□ 0.85
COL13A1Q5TAT6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.39■□□□□ 0.85
COL13A1Q5TAT6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL13A1Q5TAT6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL13A1Q5TAT6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL13A1Q5TAT6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL13A1Q5TAT6 LINC01521-201ENST00000504184 1943 ntBASIC20.39■□□□□ 0.85
COL13A1Q5TAT6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL13A1Q5TAT6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL13A1Q5TAT6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
COL13A1Q5TAT6 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms