Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 RCC2P3-201ENST00000418112 1537 ntBASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 AL512353.2-201ENST00000448759 1962 ntBASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 MIR564-202ENST00000385049 94 ntBASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 MINOS1P3-201ENST00000457048 203 ntBASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 AC024563.2-201ENST00000603282 481 ntBASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.52■□□□□ 0.71
CTC1Q2NKJ3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
CTC1Q2NKJ3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.52■□□□□ 0.71
CTC1Q2NKJ3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.52■□□□□ 0.71
CTC1Q2NKJ3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
CTC1Q2NKJ3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CTC1Q2NKJ3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
CTC1Q2NKJ3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 RPL13AP23-201ENST00000480739 586 ntBASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 MIR5100-201ENST00000579544 119 ntBASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 BNIP3P18-201ENST00000593976 575 ntBASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 AL032819.2-201ENST00000624543 2162 ntBASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.51■□□□□ 0.71
CTC1Q2NKJ3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 AL353692.3-201ENST00000407031 1396 ntBASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 AC005104.2-201ENST00000427818 678 ntBASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 AC139887.3-201ENST00000568585 713 ntBASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 AL591684.3-201ENST00000605187 298 ntBASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTC1Q2NKJ3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 KRT89P-201ENST00000620027 1478 ntBASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms