Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S1P61966 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S1P61966 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
AP1S1P61966 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S1P61966 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.38■□□□□ 0.53
AP1S1P61966 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S1P61966 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
AP1S1P61966 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S1P61966 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
AP1S1P61966 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S1P61966 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S1P61966 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S1P61966 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.38■□□□□ 0.53
AP1S1P61966 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S1P61966 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.38■□□□□ 0.53
AP1S1P61966 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
AP1S1P61966 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S1P61966 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
AP1S1P61966 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
AP1S1P61966 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S1P61966 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S1P61966 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S1P61966 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S1P61966 AC009113.1-201ENST00000570267 2443 ntBASIC18.38■□□□□ 0.53
AP1S1P61966 Z83836.1-201ENST00000624605 1642 ntBASIC18.38■□□□□ 0.53
AP1S1P61966 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.37■□□□□ 0.53
AP1S1P61966 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S1P61966 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S1P61966 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
AP1S1P61966 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.37■□□□□ 0.53
AP1S1P61966 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
AP1S1P61966 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S1P61966 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S1P61966 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S1P61966 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S1P61966 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S1P61966 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
AP1S1P61966 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S1P61966 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S1P61966 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.37■□□□□ 0.53
AP1S1P61966 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.37■□□□□ 0.53
AP1S1P61966 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.37■□□□□ 0.53
AP1S1P61966 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S1P61966 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
AP1S1P61966 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.37■□□□□ 0.53
AP1S1P61966 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.37■□□□□ 0.53
AP1S1P61966 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
AP1S1P61966 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
AP1S1P61966 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S1P61966 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S1P61966 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S1P61966 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S1P61966 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S1P61966 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.37■□□□□ 0.53
AP1S1P61966 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
AP1S1P61966 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S1P61966 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
AP1S1P61966 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S1P61966 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.37■□□□□ 0.53
AP1S1P61966 AL020996.1-203ENST00000536896 2307 ntBASIC18.37■□□□□ 0.53
AP1S1P61966 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
AP1S1P61966 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.37■□□□□ 0.53
AP1S1P61966 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.37■□□□□ 0.53
AP1S1P61966 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.37■□□□□ 0.53
AP1S1P61966 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S1P61966 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
AP1S1P61966 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S1P61966 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S1P61966 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S1P61966 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S1P61966 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S1P61966 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S1P61966 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S1P61966 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S1P61966 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S1P61966 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S1P61966 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S1P61966 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S1P61966 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S1P61966 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S1P61966 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S1P61966 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S1P61966 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.36■□□□□ 0.53
AP1S1P61966 AL353692.3-201ENST00000407031 1396 ntBASIC18.36■□□□□ 0.53
AP1S1P61966 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.36■□□□□ 0.53
AP1S1P61966 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.36■□□□□ 0.53
AP1S1P61966 TSPY22P-201ENST00000427496 604 ntBASIC18.36■□□□□ 0.53
AP1S1P61966 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S1P61966 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.36■□□□□ 0.53
AP1S1P61966 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.36■□□□□ 0.53
AP1S1P61966 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S1P61966 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.36■□□□□ 0.53
AP1S1P61966 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S1P61966 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.36■□□□□ 0.53
AP1S1P61966 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.36■□□□□ 0.53
AP1S1P61966 AC093677.2-201ENST00000600169 1863 ntBASIC18.36■□□□□ 0.53
AP1S1P61966 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.36■□□□□ 0.53
AP1S1P61966 AC004263.2-201ENST00000617183 678 ntBASIC18.36■□□□□ 0.53
AP1S1P61966 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
AP1S1P61966 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms