Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASP6P55212 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CASP6P55212 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CASP6P55212 AL590627.1-203ENST00000421194 1026 ntBASIC16.42■□□□□ 0.22
CASP6P55212 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.42■□□□□ 0.22
CASP6P55212 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.42■□□□□ 0.22
CASP6P55212 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.42■□□□□ 0.22
CASP6P55212 AC093909.1-201ENST00000504731 1122 ntBASIC16.42■□□□□ 0.22
CASP6P55212 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.42■□□□□ 0.22
CASP6P55212 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.42■□□□□ 0.22
CASP6P55212 AC117500.6-201ENST00000624871 588 ntBASIC16.42■□□□□ 0.22
CASP6P55212 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.42■□□□□ 0.22
CASP6P55212 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.42■□□□□ 0.22
CASP6P55212 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CASP6P55212 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CASP6P55212 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASP6P55212 AL157384.1-201ENST00000445995 2473 ntBASIC16.42■□□□□ 0.22
CASP6P55212 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CASP6P55212 PKD1P1-201ENST00000458669 6805 ntBASIC16.42■□□□□ 0.22
CASP6P55212 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.42■□□□□ 0.22
CASP6P55212 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASP6P55212 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASP6P55212 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASP6P55212 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CASP6P55212 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CASP6P55212 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CASP6P55212 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASP6P55212 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
CASP6P55212 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASP6P55212 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.41■□□□□ 0.22
CASP6P55212 IRX1P1-201ENST00000438849 1838 ntBASIC16.41■□□□□ 0.22
CASP6P55212 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASP6P55212 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASP6P55212 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASP6P55212 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CASP6P55212 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CASP6P55212 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CASP6P55212 AP000593.1-201ENST00000393668 712 ntBASIC16.41■□□□□ 0.22
CASP6P55212 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CASP6P55212 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.41■□□□□ 0.22
CASP6P55212 RN7SL606P-201ENST00000472779 293 ntBASIC16.41■□□□□ 0.22
CASP6P55212 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.41■□□□□ 0.22
CASP6P55212 BX640515.1-201ENST00000617215 977 ntBASIC16.41■□□□□ 0.22
CASP6P55212 REXO1L6P-202ENST00000619970 1078 ntBASIC16.41■□□□□ 0.22
CASP6P55212 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
CASP6P55212 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.41■□□□□ 0.22
CASP6P55212 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CASP6P55212 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CASP6P55212 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.41■□□□□ 0.22
CASP6P55212 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CASP6P55212 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CASP6P55212 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CASP6P55212 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASP6P55212 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.41■□□□□ 0.22
CASP6P55212 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASP6P55212 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASP6P55212 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CASP6P55212 AC112907.3-201ENST00000577781 2400 ntBASIC16.4■□□□□ 0.22
CASP6P55212 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.4■□□□□ 0.22
CASP6P55212 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASP6P55212 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.4■□□□□ 0.22
CASP6P55212 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASP6P55212 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASP6P55212 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CASP6P55212 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASP6P55212 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASP6P55212 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.4■□□□□ 0.22
CASP6P55212 AP001005.1-201ENST00000571755 1248 ntBASIC16.4■□□□□ 0.22
CASP6P55212 AC006538.3-201ENST00000612495 578 ntBASIC16.4■□□□□ 0.22
CASP6P55212 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.4■□□□□ 0.22
CASP6P55212 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASP6P55212 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASP6P55212 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CASP6P55212 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASP6P55212 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASP6P55212 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASP6P55212 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CASP6P55212 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASP6P55212 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASP6P55212 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CASP6P55212 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASP6P55212 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CASP6P55212 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CASP6P55212 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.4■□□□□ 0.22
CASP6P55212 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CASP6P55212 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CASP6P55212 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CASP6P55212 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CASP6P55212 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CASP6P55212 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CASP6P55212 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CASP6P55212 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.39■□□□□ 0.21
CASP6P55212 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASP6P55212 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASP6P55212 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASP6P55212 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.39■□□□□ 0.21
CASP6P55212 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASP6P55212 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.39■□□□□ 0.21
CASP6P55212 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CASP6P55212 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms