Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PSMD4P55036 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PSMD4P55036 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.04■□□□□ 0.32
PSMD4P55036 BX664615.1-201ENST00000443558 458 ntBASIC17.04■□□□□ 0.32
PSMD4P55036 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.04■□□□□ 0.32
PSMD4P55036 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.04■□□□□ 0.32
PSMD4P55036 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
PSMD4P55036 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.04■□□□□ 0.32
PSMD4P55036 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PSMD4P55036 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PSMD4P55036 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PSMD4P55036 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PSMD4P55036 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PSMD4P55036 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PSMD4P55036 AC104581.1-202ENST00000635932 2618 ntBASIC17.04■□□□□ 0.32
PSMD4P55036 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.04■□□□□ 0.32
PSMD4P55036 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PSMD4P55036 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PSMD4P55036 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PSMD4P55036 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PSMD4P55036 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PSMD4P55036 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PSMD4P55036 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PSMD4P55036 BICD1-207ENST00000551848 1962 ntBASIC17.04■□□□□ 0.32
PSMD4P55036 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PSMD4P55036 AC135050.7-201ENST00000624508 2218 ntBASIC17.04■□□□□ 0.32
PSMD4P55036 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PSMD4P55036 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.04■□□□□ 0.32
PSMD4P55036 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PSMD4P55036 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PSMD4P55036 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PSMD4P55036 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PSMD4P55036 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.03■□□□□ 0.32
PSMD4P55036 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.03■□□□□ 0.32
PSMD4P55036 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PSMD4P55036 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PSMD4P55036 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
PSMD4P55036 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.03■□□□□ 0.32
PSMD4P55036 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PSMD4P55036 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PSMD4P55036 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.03■□□□□ 0.32
PSMD4P55036 TERF1P1-201ENST00000311003 1181 ntBASIC17.03■□□□□ 0.32
PSMD4P55036 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PSMD4P55036 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.03■□□□□ 0.32
PSMD4P55036 MIR149-201ENST00000384879 89 ntBASIC17.03■□□□□ 0.32
PSMD4P55036 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PSMD4P55036 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.03■□□□□ 0.32
PSMD4P55036 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.03■□□□□ 0.32
PSMD4P55036 COX11P1-201ENST00000489116 835 ntBASIC17.03■□□□□ 0.32
PSMD4P55036 AC034232.1-201ENST00000506026 1064 ntBASIC17.03■□□□□ 0.32
PSMD4P55036 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PSMD4P55036 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.03■□□□□ 0.32
PSMD4P55036 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.03■□□□□ 0.32
PSMD4P55036 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.03■□□□□ 0.32
PSMD4P55036 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.03■□□□□ 0.32
PSMD4P55036 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PSMD4P55036 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.03■□□□□ 0.32
PSMD4P55036 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PSMD4P55036 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.03■□□□□ 0.32
PSMD4P55036 AC009102.3-201ENST00000623118 1491 ntBASIC17.03■□□□□ 0.32
PSMD4P55036 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PSMD4P55036 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PSMD4P55036 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PSMD4P55036 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PSMD4P55036 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.03■□□□□ 0.32
PSMD4P55036 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.03■□□□□ 0.32
PSMD4P55036 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PSMD4P55036 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.02■□□□□ 0.32
PSMD4P55036 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PSMD4P55036 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.02■□□□□ 0.32
PSMD4P55036 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PSMD4P55036 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PSMD4P55036 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.02■□□□□ 0.32
PSMD4P55036 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PSMD4P55036 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PSMD4P55036 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.02■□□□□ 0.32
PSMD4P55036 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PSMD4P55036 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PSMD4P55036 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PSMD4P55036 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PSMD4P55036 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PSMD4P55036 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PSMD4P55036 AC010203.1-204ENST00000548782 407 ntBASIC17.02■□□□□ 0.32
PSMD4P55036 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.02■□□□□ 0.32
PSMD4P55036 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.02■□□□□ 0.32
PSMD4P55036 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.02■□□□□ 0.32
PSMD4P55036 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.02■□□□□ 0.32
PSMD4P55036 AC010240.3-201ENST00000607688 395 ntBASIC17.02■□□□□ 0.32
PSMD4P55036 AC024243.1-201ENST00000609234 778 ntBASIC17.02■□□□□ 0.32
PSMD4P55036 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.02■□□□□ 0.32
PSMD4P55036 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PSMD4P55036 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PSMD4P55036 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PSMD4P55036 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PSMD4P55036 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PSMD4P55036 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PSMD4P55036 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PSMD4P55036 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PSMD4P55036 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.02■□□□□ 0.31
PSMD4P55036 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms