Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
POLR2JP52435 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2JP52435 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2JP52435 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
POLR2JP52435 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2JP52435 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2JP52435 AC096733.2-201ENST00000609937 1394 ntBASIC17.51■□□□□ 0.39
POLR2JP52435 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2JP52435 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.51■□□□□ 0.39
POLR2JP52435 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2JP52435 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2JP52435 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.5■□□□□ 0.39
POLR2JP52435 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2JP52435 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2JP52435 AC139713.2-201ENST00000641328 2723 ntBASIC17.5■□□□□ 0.39
POLR2JP52435 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.5■□□□□ 0.39
POLR2JP52435 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
POLR2JP52435 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
POLR2JP52435 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.5■□□□□ 0.39
POLR2JP52435 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
POLR2JP52435 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.5■□□□□ 0.39
POLR2JP52435 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.5■□□□□ 0.39
POLR2JP52435 RPPH1-201ENST00000516869 333 ntBASIC17.5■□□□□ 0.39
POLR2JP52435 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.5■□□□□ 0.39
POLR2JP52435 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.5■□□□□ 0.39
POLR2JP52435 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2JP52435 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.5■□□□□ 0.39
POLR2JP52435 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2JP52435 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.5■□□□□ 0.39
POLR2JP52435 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.5■□□□□ 0.39
POLR2JP52435 SDHAP2-201ENST00000455183 2001 ntBASIC17.5■□□□□ 0.39
POLR2JP52435 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.5■□□□□ 0.39
POLR2JP52435 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2JP52435 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2JP52435 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2JP52435 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2JP52435 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2JP52435 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.49■□□□□ 0.39
POLR2JP52435 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2JP52435 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2JP52435 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2JP52435 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2JP52435 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
POLR2JP52435 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
POLR2JP52435 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2JP52435 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.49■□□□□ 0.39
POLR2JP52435 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.49■□□□□ 0.39
POLR2JP52435 AL163051.1-201ENST00000569214 1512 ntBASIC17.49■□□□□ 0.39
POLR2JP52435 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2JP52435 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.49■□□□□ 0.39
POLR2JP52435 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2JP52435 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
POLR2JP52435 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.49■□□□□ 0.39
POLR2JP52435 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.49■□□□□ 0.39
POLR2JP52435 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.49■□□□□ 0.39
POLR2JP52435 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.49■□□□□ 0.39
POLR2JP52435 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
POLR2JP52435 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.49■□□□□ 0.39
POLR2JP52435 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
POLR2JP52435 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2JP52435 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2JP52435 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2JP52435 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2JP52435 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2JP52435 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2JP52435 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2JP52435 AC009102.3-201ENST00000623118 1491 ntBASIC17.49■□□□□ 0.39
POLR2JP52435 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2JP52435 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
POLR2JP52435 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2JP52435 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2JP52435 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2JP52435 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.48■□□□□ 0.39
POLR2JP52435 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2JP52435 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.48■□□□□ 0.39
POLR2JP52435 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.48■□□□□ 0.39
POLR2JP52435 SIRPAP1-201ENST00000448467 1770 ntBASIC17.48■□□□□ 0.39
POLR2JP52435 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2JP52435 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2JP52435 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2JP52435 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
POLR2JP52435 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2JP52435 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2JP52435 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2JP52435 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2JP52435 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2JP52435 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.48■□□□□ 0.39
POLR2JP52435 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2JP52435 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2JP52435 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
POLR2JP52435 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2JP52435 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
POLR2JP52435 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2JP52435 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.48■□□□□ 0.39
POLR2JP52435 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.48■□□□□ 0.39
POLR2JP52435 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2JP52435 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.48■□□□□ 0.39
POLR2JP52435 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2JP52435 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
POLR2JP52435 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms