Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC128688.1-201ENST00000487626 519 ntBASIC17■□□□□ 0.31
RNF144AP50876 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17■□□□□ 0.31
RNF144AP50876 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17■□□□□ 0.31
RNF144AP50876 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17■□□□□ 0.31
RNF144AP50876 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17■□□□□ 0.31
RNF144AP50876 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RNF144AP50876 AC024243.1-201ENST00000609234 778 ntBASIC17■□□□□ 0.31
RNF144AP50876 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RNF144AP50876 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF144AP50876 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17■□□□□ 0.31
RNF144AP50876 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF144AP50876 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF144AP50876 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RNF144AP50876 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
RNF144AP50876 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RNF144AP50876 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF144AP50876 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF144AP50876 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17■□□□□ 0.31
RNF144AP50876 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF144AP50876 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF144AP50876 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
RNF144AP50876 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF144AP50876 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RNF144AP50876 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF144AP50876 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF144AP50876 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF144AP50876 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF144AP50876 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF144AP50876 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF144AP50876 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.99■□□□□ 0.31
RNF144AP50876 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF144AP50876 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.99■□□□□ 0.31
RNF144AP50876 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF144AP50876 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.99■□□□□ 0.31
RNF144AP50876 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF144AP50876 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF144AP50876 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.99■□□□□ 0.31
RNF144AP50876 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.99■□□□□ 0.31
RNF144AP50876 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF144AP50876 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF144AP50876 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF144AP50876 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RNF144AP50876 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF144AP50876 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RNF144AP50876 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF144AP50876 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.99■□□□□ 0.31
RNF144AP50876 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.99■□□□□ 0.31
RNF144AP50876 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF144AP50876 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.99■□□□□ 0.31
RNF144AP50876 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF144AP50876 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF144AP50876 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF144AP50876 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF144AP50876 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF144AP50876 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF144AP50876 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.98■□□□□ 0.31
RNF144AP50876 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF144AP50876 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF144AP50876 AC068880.1-201ENST00000507289 2297 ntBASIC16.98■□□□□ 0.31
RNF144AP50876 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF144AP50876 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF144AP50876 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF144AP50876 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.98■□□□□ 0.31
RNF144AP50876 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RNF144AP50876 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.98■□□□□ 0.31
RNF144AP50876 AC010203.1-204ENST00000548782 407 ntBASIC16.98■□□□□ 0.31
RNF144AP50876 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.98■□□□□ 0.31
RNF144AP50876 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RNF144AP50876 MYC-208ENST00000641036 567 ntBASIC16.98■□□□□ 0.31
RNF144AP50876 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.98■□□□□ 0.31
RNF144AP50876 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RNF144AP50876 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.98■□□□□ 0.31
RNF144AP50876 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.98■□□□□ 0.31
RNF144AP50876 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF144AP50876 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
RNF144AP50876 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RNF144AP50876 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF144AP50876 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF144AP50876 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF144AP50876 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.98■□□□□ 0.31
RNF144AP50876 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF144AP50876 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF144AP50876 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF144AP50876 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF144AP50876 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF144AP50876 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF144AP50876 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF144AP50876 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF144AP50876 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF144AP50876 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RNF144AP50876 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF144AP50876 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF144AP50876 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF144AP50876 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF144AP50876 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF144AP50876 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
RNF144AP50876 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RNF144AP50876 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RNF144AP50876 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
RNF144AP50876 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms