Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.85■□□□□ 0.93
COPB2P35606 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPB2P35606 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPB2P35606 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPB2P35606 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.85■□□□□ 0.93
COPB2P35606 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.85■□□□□ 0.93
COPB2P35606 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.85■□□□□ 0.93
COPB2P35606 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.85■□□□□ 0.93
COPB2P35606 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.85■□□□□ 0.93
COPB2P35606 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPB2P35606 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.85■□□□□ 0.93
COPB2P35606 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
COPB2P35606 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.85■□□□□ 0.93
COPB2P35606 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.85■□□□□ 0.93
COPB2P35606 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
COPB2P35606 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPB2P35606 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPB2P35606 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPB2P35606 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
COPB2P35606 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.85■□□□□ 0.93
COPB2P35606 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPB2P35606 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COPB2P35606 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.84■□□□□ 0.93
COPB2P35606 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COPB2P35606 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COPB2P35606 AL024508.2-201ENST00000607749 1894 ntBASIC20.84■□□□□ 0.93
COPB2P35606 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
COPB2P35606 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
COPB2P35606 SDHAP2-201ENST00000455183 2001 ntBASIC20.84■□□□□ 0.93
COPB2P35606 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COPB2P35606 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COPB2P35606 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COPB2P35606 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COPB2P35606 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COPB2P35606 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.84■□□□□ 0.93
COPB2P35606 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.84■□□□□ 0.93
COPB2P35606 AC068472.1-201ENST00000474589 881 ntBASIC20.84■□□□□ 0.93
COPB2P35606 AC079776.4-201ENST00000511039 504 ntBASIC20.84■□□□□ 0.93
COPB2P35606 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.84■□□□□ 0.93
COPB2P35606 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.84■□□□□ 0.93
COPB2P35606 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.84■□□□□ 0.93
COPB2P35606 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.84■□□□□ 0.93
COPB2P35606 BX640515.1-201ENST00000617215 977 ntBASIC20.84■□□□□ 0.93
COPB2P35606 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
COPB2P35606 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COPB2P35606 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COPB2P35606 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COPB2P35606 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.84■□□□□ 0.93
COPB2P35606 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COPB2P35606 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COPB2P35606 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COPB2P35606 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COPB2P35606 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.83■□□□□ 0.93
COPB2P35606 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COPB2P35606 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.83■□□□□ 0.93
COPB2P35606 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.83■□□□□ 0.93
COPB2P35606 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.83■□□□□ 0.93
COPB2P35606 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.83■□□□□ 0.93
COPB2P35606 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.83■□□□□ 0.93
COPB2P35606 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.83■□□□□ 0.93
COPB2P35606 AC009533.2-201ENST00000543664 586 ntBASIC20.83■□□□□ 0.93
COPB2P35606 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.83■□□□□ 0.93
COPB2P35606 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.83■□□□□ 0.93
COPB2P35606 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.83■□□□□ 0.93
COPB2P35606 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COPB2P35606 AL773604.1-201ENST00000617417 272 ntBASIC20.83■□□□□ 0.93
COPB2P35606 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COPB2P35606 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
COPB2P35606 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.83■□□□□ 0.92
COPB2P35606 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COPB2P35606 AC005332.7-201ENST00000614046 2005 ntBASIC20.83■□□□□ 0.92
COPB2P35606 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
COPB2P35606 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
COPB2P35606 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
COPB2P35606 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.83■□□□□ 0.92
COPB2P35606 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.83■□□□□ 0.92
COPB2P35606 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COPB2P35606 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
COPB2P35606 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.82■□□□□ 0.92
COPB2P35606 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.82■□□□□ 0.92
COPB2P35606 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COPB2P35606 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COPB2P35606 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COPB2P35606 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COPB2P35606 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COPB2P35606 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.82■□□□□ 0.92
COPB2P35606 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.82■□□□□ 0.92
COPB2P35606 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COPB2P35606 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
COPB2P35606 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COPB2P35606 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COPB2P35606 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COPB2P35606 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COPB2P35606 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.82■□□□□ 0.92
COPB2P35606 AP001005.1-201ENST00000571755 1248 ntBASIC20.82■□□□□ 0.92
COPB2P35606 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COPB2P35606 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COPB2P35606 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COPB2P35606 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COPB2P35606 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms