Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPA3P35244 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.51■□□□□ 0.55
RPA3P35244 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RPA3P35244 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPA3P35244 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.5■□□□□ 0.55
RPA3P35244 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPA3P35244 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RPA3P35244 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPA3P35244 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPA3P35244 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPA3P35244 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPA3P35244 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPA3P35244 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.5■□□□□ 0.55
RPA3P35244 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RPA3P35244 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.5■□□□□ 0.55
RPA3P35244 AL596275.1-201ENST00000423464 877 ntBASIC18.5■□□□□ 0.55
RPA3P35244 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPA3P35244 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.5■□□□□ 0.55
RPA3P35244 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.5■□□□□ 0.55
RPA3P35244 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.5■□□□□ 0.55
RPA3P35244 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.5■□□□□ 0.55
RPA3P35244 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPA3P35244 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPA3P35244 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPA3P35244 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.5■□□□□ 0.55
RPA3P35244 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.5■□□□□ 0.55
RPA3P35244 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.5■□□□□ 0.55
RPA3P35244 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPA3P35244 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPA3P35244 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPA3P35244 MYLKP1-201ENST00000509077 1580 ntBASIC18.5■□□□□ 0.55
RPA3P35244 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPA3P35244 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.5■□□□□ 0.55
RPA3P35244 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RPA3P35244 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
RPA3P35244 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPA3P35244 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RPA3P35244 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPA3P35244 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.49■□□□□ 0.55
RPA3P35244 FLJ13224-201ENST00000313737 1514 ntBASIC18.49■□□□□ 0.55
RPA3P35244 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPA3P35244 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RPA3P35244 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPA3P35244 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPA3P35244 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPA3P35244 MESTP1-201ENST00000404287 994 ntBASIC18.49■□□□□ 0.55
RPA3P35244 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.49■□□□□ 0.55
RPA3P35244 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.49■□□□□ 0.55
RPA3P35244 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
RPA3P35244 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RPA3P35244 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPA3P35244 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPA3P35244 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPA3P35244 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RPA3P35244 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.49■□□□□ 0.55
RPA3P35244 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPA3P35244 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPA3P35244 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPA3P35244 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPA3P35244 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPA3P35244 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPA3P35244 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.49■□□□□ 0.55
RPA3P35244 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPA3P35244 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RPA3P35244 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPA3P35244 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPA3P35244 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPA3P35244 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPA3P35244 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPA3P35244 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPA3P35244 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RPA3P35244 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPA3P35244 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.48■□□□□ 0.55
RPA3P35244 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.48■□□□□ 0.55
RPA3P35244 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RPA3P35244 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.48■□□□□ 0.55
RPA3P35244 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
RPA3P35244 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.48■□□□□ 0.55
RPA3P35244 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.48■□□□□ 0.55
RPA3P35244 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.48■□□□□ 0.55
RPA3P35244 DGCR10-201ENST00000609839 495 ntBASIC18.48■□□□□ 0.55
RPA3P35244 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPA3P35244 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.48■□□□□ 0.55
RPA3P35244 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPA3P35244 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.48■□□□□ 0.55
RPA3P35244 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPA3P35244 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPA3P35244 AC108860.2-201ENST00000562760 2183 ntBASIC18.48■□□□□ 0.55
RPA3P35244 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.48■□□□□ 0.55
RPA3P35244 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.48■□□□□ 0.55
RPA3P35244 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPA3P35244 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPA3P35244 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
RPA3P35244 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPA3P35244 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPA3P35244 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPA3P35244 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.47■□□□□ 0.55
RPA3P35244 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPA3P35244 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.47■□□□□ 0.55
RPA3P35244 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms