Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EPHA3P29320 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.81■□□□□ 0.44
EPHA3P29320 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
EPHA3P29320 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
EPHA3P29320 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
EPHA3P29320 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
EPHA3P29320 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EPHA3P29320 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EPHA3P29320 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.81■□□□□ 0.44
EPHA3P29320 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EPHA3P29320 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EPHA3P29320 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.81■□□□□ 0.44
EPHA3P29320 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EPHA3P29320 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.81■□□□□ 0.44
EPHA3P29320 FAM207BP-201ENST00000447172 505 ntBASIC17.81■□□□□ 0.44
EPHA3P29320 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
EPHA3P29320 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.81■□□□□ 0.44
EPHA3P29320 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EPHA3P29320 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.81■□□□□ 0.44
EPHA3P29320 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EPHA3P29320 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
EPHA3P29320 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EPHA3P29320 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EPHA3P29320 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.81■□□□□ 0.44
EPHA3P29320 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
EPHA3P29320 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.81■□□□□ 0.44
EPHA3P29320 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
EPHA3P29320 OR6D1P-202ENST00000641007 5290 ntBASIC17.81■□□□□ 0.44
EPHA3P29320 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EPHA3P29320 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
EPHA3P29320 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.81■□□□□ 0.44
EPHA3P29320 KRT16P1-201ENST00000399124 1418 ntBASIC17.81■□□□□ 0.44
EPHA3P29320 KRT8P50-201ENST00000562022 1438 ntBASIC17.81■□□□□ 0.44
EPHA3P29320 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
EPHA3P29320 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
EPHA3P29320 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.8■□□□□ 0.44
EPHA3P29320 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EPHA3P29320 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.8■□□□□ 0.44
EPHA3P29320 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EPHA3P29320 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EPHA3P29320 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EPHA3P29320 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.8■□□□□ 0.44
EPHA3P29320 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.8■□□□□ 0.44
EPHA3P29320 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
EPHA3P29320 AC130371.2-201ENST00000619443 611 ntBASIC17.8■□□□□ 0.44
EPHA3P29320 CR392000.1-201ENST00000624770 1228 ntBASIC17.8■□□□□ 0.44
EPHA3P29320 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.8■□□□□ 0.44
EPHA3P29320 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EPHA3P29320 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.8■□□□□ 0.44
EPHA3P29320 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EPHA3P29320 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
EPHA3P29320 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
EPHA3P29320 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EPHA3P29320 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EPHA3P29320 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.8■□□□□ 0.44
EPHA3P29320 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EPHA3P29320 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EPHA3P29320 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EPHA3P29320 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
EPHA3P29320 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EPHA3P29320 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EPHA3P29320 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
EPHA3P29320 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
EPHA3P29320 AC141586.5-201ENST00000624546 2050 ntBASIC17.79■□□□□ 0.44
EPHA3P29320 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EPHA3P29320 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EPHA3P29320 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.79■□□□□ 0.44
EPHA3P29320 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
EPHA3P29320 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EPHA3P29320 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EPHA3P29320 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EPHA3P29320 AC006116.8-202ENST00000587620 1550 ntBASIC17.79■□□□□ 0.44
EPHA3P29320 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.79■□□□□ 0.44
EPHA3P29320 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
EPHA3P29320 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
EPHA3P29320 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EPHA3P29320 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
EPHA3P29320 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EPHA3P29320 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
EPHA3P29320 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EPHA3P29320 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EPHA3P29320 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EPHA3P29320 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.79■□□□□ 0.44
EPHA3P29320 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.79■□□□□ 0.44
EPHA3P29320 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
EPHA3P29320 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.79■□□□□ 0.44
EPHA3P29320 AC026271.3-201ENST00000571884 352 ntBASIC17.79■□□□□ 0.44
EPHA3P29320 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EPHA3P29320 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.79■□□□□ 0.44
EPHA3P29320 AL031985.4-201ENST00000642138 673 ntBASIC17.79■□□□□ 0.44
EPHA3P29320 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.79■□□□□ 0.44
EPHA3P29320 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
EPHA3P29320 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EPHA3P29320 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.79■□□□□ 0.44
EPHA3P29320 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EPHA3P29320 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EPHA3P29320 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EPHA3P29320 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EPHA3P29320 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EPHA3P29320 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms