Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCL4P13236 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCL4P13236 AC005082.1-201ENST00000413042 2259 ntBASIC17.23■□□□□ 0.35
CCL4P13236 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL4P13236 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL4P13236 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCL4P13236 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL4P13236 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL4P13236 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.22■□□□□ 0.35
CCL4P13236 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL4P13236 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.22■□□□□ 0.35
CCL4P13236 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL4P13236 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CCL4P13236 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.22■□□□□ 0.35
CCL4P13236 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL4P13236 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL4P13236 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCL4P13236 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL4P13236 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL4P13236 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL4P13236 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCL4P13236 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.22■□□□□ 0.35
CCL4P13236 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCL4P13236 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL4P13236 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.22■□□□□ 0.35
CCL4P13236 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CCL4P13236 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.22■□□□□ 0.35
CCL4P13236 FGFR3P6-201ENST00000457012 610 ntBASIC17.22■□□□□ 0.35
CCL4P13236 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.22■□□□□ 0.35
CCL4P13236 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.22■□□□□ 0.35
CCL4P13236 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCL4P13236 AC243591.1-201ENST00000452967 1364 ntBASIC17.22■□□□□ 0.35
CCL4P13236 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL4P13236 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCL4P13236 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.22■□□□□ 0.35
CCL4P13236 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCL4P13236 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCL4P13236 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL4P13236 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL4P13236 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCL4P13236 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCL4P13236 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.21■□□□□ 0.35
CCL4P13236 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL4P13236 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL4P13236 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL4P13236 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCL4P13236 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCL4P13236 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCL4P13236 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL4P13236 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CCL4P13236 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.21■□□□□ 0.35
CCL4P13236 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.21■□□□□ 0.35
CCL4P13236 PMS2P1-201ENST00000431037 1228 ntBASIC17.21■□□□□ 0.35
CCL4P13236 AC018712.1-201ENST00000455767 687 ntBASIC17.21■□□□□ 0.35
CCL4P13236 AC093909.1-201ENST00000504731 1122 ntBASIC17.21■□□□□ 0.35
CCL4P13236 AC009533.2-201ENST00000543664 586 ntBASIC17.21■□□□□ 0.35
CCL4P13236 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.21■□□□□ 0.35
CCL4P13236 AP001269.4-201ENST00000609611 512 ntBASIC17.21■□□□□ 0.35
CCL4P13236 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.21■□□□□ 0.35
CCL4P13236 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.21■□□□□ 0.35
CCL4P13236 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL4P13236 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL4P13236 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL4P13236 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCL4P13236 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.21■□□□□ 0.34
CCL4P13236 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCL4P13236 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCL4P13236 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCL4P13236 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL4P13236 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CCL4P13236 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.2■□□□□ 0.34
CCL4P13236 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL4P13236 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL4P13236 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL4P13236 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL4P13236 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.2■□□□□ 0.34
CCL4P13236 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CCL4P13236 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CCL4P13236 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.2■□□□□ 0.34
CCL4P13236 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.2■□□□□ 0.34
CCL4P13236 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.2■□□□□ 0.34
CCL4P13236 AL138831.2-201ENST00000606564 490 ntBASIC17.2■□□□□ 0.34
CCL4P13236 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.2■□□□□ 0.34
CCL4P13236 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.2■□□□□ 0.34
CCL4P13236 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL4P13236 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL4P13236 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL4P13236 INTS4P1-201ENST00000438455 1935 ntBASIC17.19■□□□□ 0.34
CCL4P13236 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL4P13236 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCL4P13236 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCL4P13236 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCL4P13236 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL4P13236 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCL4P13236 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL4P13236 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL4P13236 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
CCL4P13236 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL4P13236 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
CCL4P13236 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms