Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THBS1P07996 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THBS1P07996 HMGA1P5-201ENST00000412453 271 ntBASIC16.84■□□□□ 0.29
THBS1P07996 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.84■□□□□ 0.29
THBS1P07996 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.84■□□□□ 0.29
THBS1P07996 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.84■□□□□ 0.29
THBS1P07996 NEK4P2-201ENST00000580004 1012 ntBASIC16.84■□□□□ 0.29
THBS1P07996 AC145285.6-201ENST00000604632 637 ntBASIC16.84■□□□□ 0.29
THBS1P07996 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.84■□□□□ 0.29
THBS1P07996 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THBS1P07996 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS1P07996 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THBS1P07996 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
THBS1P07996 KRT8P9-201ENST00000558927 1449 ntBASIC16.84■□□□□ 0.29
THBS1P07996 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS1P07996 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.84■□□□□ 0.29
THBS1P07996 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.84■□□□□ 0.29
THBS1P07996 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS1P07996 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS1P07996 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
THBS1P07996 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS1P07996 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THBS1P07996 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
THBS1P07996 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.83■□□□□ 0.29
THBS1P07996 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.83■□□□□ 0.29
THBS1P07996 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
THBS1P07996 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
THBS1P07996 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
THBS1P07996 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
THBS1P07996 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
THBS1P07996 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THBS1P07996 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THBS1P07996 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
THBS1P07996 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THBS1P07996 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
THBS1P07996 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.83■□□□□ 0.28
THBS1P07996 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THBS1P07996 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
THBS1P07996 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
THBS1P07996 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.83■□□□□ 0.28
THBS1P07996 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THBS1P07996 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
THBS1P07996 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THBS1P07996 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.83■□□□□ 0.28
THBS1P07996 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.83■□□□□ 0.28
THBS1P07996 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
THBS1P07996 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
THBS1P07996 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.83■□□□□ 0.28
THBS1P07996 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
THBS1P07996 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THBS1P07996 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THBS1P07996 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
THBS1P07996 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
THBS1P07996 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.82■□□□□ 0.28
THBS1P07996 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
THBS1P07996 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 AL024508.2-201ENST00000607749 1894 ntBASIC16.82■□□□□ 0.28
THBS1P07996 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.82■□□□□ 0.28
THBS1P07996 LINC01126-201ENST00000623515 1646 ntBASIC16.82■□□□□ 0.28
THBS1P07996 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.82■□□□□ 0.28
THBS1P07996 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 AC009947.2-201ENST00000444014 672 ntBASIC16.82■□□□□ 0.28
THBS1P07996 SEC1P-202ENST00000473944 940 ntBASIC16.82■□□□□ 0.28
THBS1P07996 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.82■□□□□ 0.28
THBS1P07996 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.82■□□□□ 0.28
THBS1P07996 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.82■□□□□ 0.28
THBS1P07996 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.82■□□□□ 0.28
THBS1P07996 FAM87A-204ENST00000613235 858 ntBASIC16.82■□□□□ 0.28
THBS1P07996 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.82■□□□□ 0.28
THBS1P07996 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.82■□□□□ 0.28
THBS1P07996 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.82■□□□□ 0.28
THBS1P07996 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 GNAS-203ENST00000306120 1878 ntBASIC16.82■□□□□ 0.28
THBS1P07996 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.82■□□□□ 0.28
THBS1P07996 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
THBS1P07996 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
THBS1P07996 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THBS1P07996 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms