Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APOA4P06727 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.35■□□□□ 0.53
APOA4P06727 AL512604.3-201ENST00000569583 964 ntBASIC18.35■□□□□ 0.53
APOA4P06727 AC145285.6-201ENST00000604632 637 ntBASIC18.35■□□□□ 0.53
APOA4P06727 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APOA4P06727 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
APOA4P06727 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
APOA4P06727 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
APOA4P06727 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
APOA4P06727 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
APOA4P06727 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.35■□□□□ 0.53
APOA4P06727 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APOA4P06727 ESPNP-201ENST00000270691 2015 ntBASIC18.35■□□□□ 0.53
APOA4P06727 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APOA4P06727 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.35■□□□□ 0.53
APOA4P06727 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.35■□□□□ 0.53
APOA4P06727 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APOA4P06727 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.35■□□□□ 0.53
APOA4P06727 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APOA4P06727 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.34■□□□□ 0.53
APOA4P06727 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOA4P06727 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APOA4P06727 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.34■□□□□ 0.53
APOA4P06727 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOA4P06727 AC036111.1-201ENST00000533973 1582 ntBASIC18.34■□□□□ 0.53
APOA4P06727 AC067852.2-201ENST00000590513 2313 ntBASIC18.34■□□□□ 0.53
APOA4P06727 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.34■□□□□ 0.53
APOA4P06727 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
APOA4P06727 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOA4P06727 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOA4P06727 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
APOA4P06727 MIR564-202ENST00000385049 94 ntBASIC18.34■□□□□ 0.53
APOA4P06727 HMGA1P5-201ENST00000412453 271 ntBASIC18.34■□□□□ 0.53
APOA4P06727 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.34■□□□□ 0.53
APOA4P06727 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.34■□□□□ 0.53
APOA4P06727 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
APOA4P06727 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.34■□□□□ 0.53
APOA4P06727 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.34■□□□□ 0.53
APOA4P06727 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
APOA4P06727 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOA4P06727 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
APOA4P06727 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APOA4P06727 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.34■□□□□ 0.53
APOA4P06727 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOA4P06727 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
APOA4P06727 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
APOA4P06727 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APOA4P06727 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOA4P06727 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
APOA4P06727 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.33■□□□□ 0.53
APOA4P06727 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
APOA4P06727 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
APOA4P06727 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
APOA4P06727 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
APOA4P06727 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
APOA4P06727 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
APOA4P06727 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.33■□□□□ 0.53
APOA4P06727 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
APOA4P06727 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
APOA4P06727 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.33■□□□□ 0.53
APOA4P06727 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.33■□□□□ 0.53
APOA4P06727 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
APOA4P06727 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APOA4P06727 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
APOA4P06727 AP000593.1-201ENST00000393668 712 ntBASIC18.33■□□□□ 0.52
APOA4P06727 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APOA4P06727 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.33■□□□□ 0.52
APOA4P06727 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.33■□□□□ 0.52
APOA4P06727 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
APOA4P06727 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.33■□□□□ 0.52
APOA4P06727 WWOX-216ENST00000569818 525 ntBASIC18.33■□□□□ 0.52
APOA4P06727 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
APOA4P06727 FAM87A-204ENST00000613235 858 ntBASIC18.33■□□□□ 0.52
APOA4P06727 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
APOA4P06727 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.33■□□□□ 0.52
APOA4P06727 CR769767.2-201ENST00000622735 460 ntBASIC18.33■□□□□ 0.52
APOA4P06727 AC133561.5-201ENST00000635547 218 ntBASIC18.33■□□□□ 0.52
APOA4P06727 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
APOA4P06727 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APOA4P06727 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.33■□□□□ 0.52
APOA4P06727 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APOA4P06727 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APOA4P06727 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
APOA4P06727 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APOA4P06727 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
APOA4P06727 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APOA4P06727 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APOA4P06727 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
APOA4P06727 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.33■□□□□ 0.52
APOA4P06727 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
APOA4P06727 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOA4P06727 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOA4P06727 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.32■□□□□ 0.52
APOA4P06727 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
APOA4P06727 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOA4P06727 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.32■□□□□ 0.52
APOA4P06727 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
APOA4P06727 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOA4P06727 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOA4P06727 AC034236.2-201ENST00000606662 1610 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms