Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 C2orf69P3-201ENST00000565542 1120 ntBASIC16.7■□□□□ 0.26
HIST1H2ABP04908 AL353719.1-201ENST00000566847 864 ntBASIC16.7■□□□□ 0.26
HIST1H2ABP04908 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2ABP04908 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H2ABP04908 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H2ABP04908 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HIST1H2ABP04908 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.69■□□□□ 0.26
HIST1H2ABP04908 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H2ABP04908 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H2ABP04908 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H2ABP04908 MIR1238-201ENST00000408483 83 ntBASIC16.69■□□□□ 0.26
HIST1H2ABP04908 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.69■□□□□ 0.26
HIST1H2ABP04908 SNORA78-201ENST00000459373 127 ntBASIC16.69■□□□□ 0.26
HIST1H2ABP04908 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
HIST1H2ABP04908 BX088651.1-201ENST00000540551 451 ntBASIC16.69■□□□□ 0.26
HIST1H2ABP04908 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H2ABP04908 AP000525.1-201ENST00000608286 694 ntBASIC16.69■□□□□ 0.26
HIST1H2ABP04908 AC116562.4-202ENST00000641738 218 ntBASIC16.69■□□□□ 0.26
HIST1H2ABP04908 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H2ABP04908 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.69■□□□□ 0.26
HIST1H2ABP04908 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.69■□□□□ 0.26
HIST1H2ABP04908 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
HIST1H2ABP04908 AC018470.1-201ENST00000624790 3129 ntBASIC16.69■□□□□ 0.26
HIST1H2ABP04908 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H2ABP04908 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H2ABP04908 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.69■□□□□ 0.26
HIST1H2ABP04908 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H2ABP04908 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H2ABP04908 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H2ABP04908 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 AP003041.3-201ENST00000527151 707 ntBASIC16.68■□□□□ 0.26
HIST1H2ABP04908 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 FITM1-202ENST00000559294 800 ntBASIC16.68■□□□□ 0.26
HIST1H2ABP04908 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2ABP04908 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.67■□□□□ 0.26
HIST1H2ABP04908 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HIST1H2ABP04908 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H2ABP04908 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms