Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.99■□□□□ 0.79
VTNP04004 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VTNP04004 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
VTNP04004 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VTNP04004 AC068472.1-201ENST00000474589 881 ntBASIC19.99■□□□□ 0.79
VTNP04004 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.99■□□□□ 0.79
VTNP04004 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VTNP04004 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.99■□□□□ 0.79
VTNP04004 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VTNP04004 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.99■□□□□ 0.79
VTNP04004 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VTNP04004 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VTNP04004 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VTNP04004 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.99■□□□□ 0.79
VTNP04004 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VTNP04004 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VTNP04004 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VTNP04004 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
VTNP04004 CROCCP3-202ENST00000420820 1947 ntBASIC19.98■□□□□ 0.79
VTNP04004 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VTNP04004 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VTNP04004 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VTNP04004 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VTNP04004 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VTNP04004 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VTNP04004 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
VTNP04004 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VTNP04004 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
VTNP04004 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.98■□□□□ 0.79
VTNP04004 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.98■□□□□ 0.79
VTNP04004 FDX1P1-201ENST00000449115 551 ntBASIC19.98■□□□□ 0.79
VTNP04004 KRT16P4-201ENST00000453883 522 ntBASIC19.98■□□□□ 0.79
VTNP04004 AC009078.2-202ENST00000463353 338 ntBASIC19.98■□□□□ 0.79
VTNP04004 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VTNP04004 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
VTNP04004 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.98■□□□□ 0.79
VTNP04004 BNIP3P18-201ENST00000593976 575 ntBASIC19.98■□□□□ 0.79
VTNP04004 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.98■□□□□ 0.79
VTNP04004 KRT8P10-201ENST00000450021 1447 ntBASIC19.98■□□□□ 0.79
VTNP04004 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VTNP04004 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VTNP04004 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.98■□□□□ 0.79
VTNP04004 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
VTNP04004 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VTNP04004 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
VTNP04004 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VTNP04004 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
VTNP04004 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VTNP04004 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VTNP04004 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.97■□□□□ 0.79
VTNP04004 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VTNP04004 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VTNP04004 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
VTNP04004 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VTNP04004 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VTNP04004 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VTNP04004 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VTNP04004 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.97■□□□□ 0.79
VTNP04004 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.97■□□□□ 0.79
VTNP04004 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VTNP04004 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VTNP04004 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VTNP04004 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VTNP04004 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VTNP04004 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VTNP04004 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
VTNP04004 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.97■□□□□ 0.79
VTNP04004 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VTNP04004 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.97■□□□□ 0.79
VTNP04004 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.97■□□□□ 0.79
VTNP04004 AC104692.2-201ENST00000603054 253 ntBASIC19.97■□□□□ 0.79
VTNP04004 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
VTNP04004 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VTNP04004 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VTNP04004 AP000974.1-201ENST00000623909 2387 ntBASIC19.97■□□□□ 0.79
VTNP04004 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.96■□□□□ 0.79
VTNP04004 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VTNP04004 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VTNP04004 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VTNP04004 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.96■□□□□ 0.79
VTNP04004 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VTNP04004 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VTNP04004 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
VTNP04004 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VTNP04004 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.96■□□□□ 0.79
VTNP04004 AKR1C7P-201ENST00000305623 895 ntBASIC19.96■□□□□ 0.79
VTNP04004 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
VTNP04004 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VTNP04004 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VTNP04004 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VTNP04004 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VTNP04004 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.96■□□□□ 0.79
VTNP04004 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.96■□□□□ 0.79
VTNP04004 AC096582.2-201ENST00000510860 516 ntBASIC19.96■□□□□ 0.79
VTNP04004 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VTNP04004 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VTNP04004 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.96■□□□□ 0.79
VTNP04004 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
VTNP04004 AC005336.2-201ENST00000593183 939 ntBASIC19.96■□□□□ 0.79
VTNP04004 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms