Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA1P02708 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.85■□□□□ 0.77
CHRNA1P02708 AP001269.4-201ENST00000609611 512 ntBASIC19.85■□□□□ 0.77
CHRNA1P02708 AC006538.3-201ENST00000612495 578 ntBASIC19.85■□□□□ 0.77
CHRNA1P02708 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA1P02708 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA1P02708 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.85■□□□□ 0.77
CHRNA1P02708 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.85■□□□□ 0.77
CHRNA1P02708 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA1P02708 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA1P02708 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.85■□□□□ 0.77
CHRNA1P02708 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA1P02708 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA1P02708 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA1P02708 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA1P02708 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CHRNA1P02708 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA1P02708 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CHRNA1P02708 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA1P02708 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA1P02708 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA1P02708 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA1P02708 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CHRNA1P02708 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CHRNA1P02708 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CHRNA1P02708 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.84■□□□□ 0.77
CHRNA1P02708 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNA1P02708 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNA1P02708 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA1P02708 MTDHP3-201ENST00000594186 672 ntBASIC19.84■□□□□ 0.77
CHRNA1P02708 AL049840.3-201ENST00000602669 611 ntBASIC19.84■□□□□ 0.77
CHRNA1P02708 GPALPP1-207ENST00000611650 899 ntBASIC19.84■□□□□ 0.77
CHRNA1P02708 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA1P02708 AC243591.1-201ENST00000452967 1364 ntBASIC19.83■□□□□ 0.77
CHRNA1P02708 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA1P02708 RNF165-205ENST00000588679 2904 ntBASIC19.83■□□□□ 0.77
CHRNA1P02708 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA1P02708 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA1P02708 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA1P02708 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.83■□□□□ 0.77
CHRNA1P02708 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA1P02708 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CHRNA1P02708 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CHRNA1P02708 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA1P02708 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA1P02708 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA1P02708 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.83■□□□□ 0.77
CHRNA1P02708 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA1P02708 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.83■□□□□ 0.77
CHRNA1P02708 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.83■□□□□ 0.77
CHRNA1P02708 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA1P02708 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA1P02708 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.83■□□□□ 0.77
CHRNA1P02708 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.83■□□□□ 0.77
CHRNA1P02708 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.83■□□□□ 0.77
CHRNA1P02708 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CHRNA1P02708 AC011467.2-201ENST00000598425 242 ntBASIC19.83■□□□□ 0.77
CHRNA1P02708 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA1P02708 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA1P02708 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHRNA1P02708 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHRNA1P02708 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.83■□□□□ 0.76
CHRNA1P02708 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHRNA1P02708 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHRNA1P02708 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.83■□□□□ 0.76
CHRNA1P02708 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHRNA1P02708 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHRNA1P02708 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHRNA1P02708 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHRNA1P02708 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CHRNA1P02708 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
CHRNA1P02708 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA1P02708 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA1P02708 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA1P02708 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.82■□□□□ 0.76
CHRNA1P02708 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.82■□□□□ 0.76
CHRNA1P02708 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.82■□□□□ 0.76
CHRNA1P02708 RBM17P3-201ENST00000417687 1192 ntBASIC19.82■□□□□ 0.76
CHRNA1P02708 HNRNPDP1-201ENST00000439535 754 ntBASIC19.82■□□□□ 0.76
CHRNA1P02708 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.82■□□□□ 0.76
CHRNA1P02708 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA1P02708 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.82■□□□□ 0.76
CHRNA1P02708 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA1P02708 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA1P02708 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.82■□□□□ 0.76
CHRNA1P02708 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.82■□□□□ 0.76
CHRNA1P02708 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA1P02708 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.82■□□□□ 0.76
CHRNA1P02708 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA1P02708 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA1P02708 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CHRNA1P02708 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.82■□□□□ 0.76
CHRNA1P02708 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA1P02708 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA1P02708 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA1P02708 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA1P02708 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA1P02708 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.81■□□□□ 0.76
CHRNA1P02708 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA1P02708 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms