Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.2■□□□□ 0.5
PRAMEF1O95521 AC112907.2-201ENST00000448639 330 ntBASIC18.2■□□□□ 0.5
PRAMEF1O95521 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF1O95521 AL049597.2-201ENST00000565575 961 ntBASIC18.2■□□□□ 0.5
PRAMEF1O95521 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.2■□□□□ 0.5
PRAMEF1O95521 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF1O95521 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF1O95521 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
PRAMEF1O95521 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF1O95521 AC093677.2-201ENST00000600169 1863 ntBASIC18.2■□□□□ 0.5
PRAMEF1O95521 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.2■□□□□ 0.5
PRAMEF1O95521 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF1O95521 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF1O95521 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF1O95521 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PRAMEF1O95521 AL391807.1-203ENST00000604392 2365 ntBASIC18.19■□□□□ 0.5
PRAMEF1O95521 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.19■□□□□ 0.5
PRAMEF1O95521 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF1O95521 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.19■□□□□ 0.5
PRAMEF1O95521 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF1O95521 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PRAMEF1O95521 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF1O95521 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PRAMEF1O95521 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.19■□□□□ 0.5
PRAMEF1O95521 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF1O95521 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF1O95521 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF1O95521 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.19■□□□□ 0.5
PRAMEF1O95521 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PRAMEF1O95521 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.19■□□□□ 0.5
PRAMEF1O95521 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF1O95521 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF1O95521 AC092597.1-201ENST00000487352 616 ntBASIC18.19■□□□□ 0.5
PRAMEF1O95521 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF1O95521 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.19■□□□□ 0.5
PRAMEF1O95521 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.19■□□□□ 0.5
PRAMEF1O95521 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.19■□□□□ 0.5
PRAMEF1O95521 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.19■□□□□ 0.5
PRAMEF1O95521 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.19■□□□□ 0.5
PRAMEF1O95521 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PRAMEF1O95521 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF1O95521 LINC01126-201ENST00000623515 1646 ntBASIC18.19■□□□□ 0.5
PRAMEF1O95521 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF1O95521 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF1O95521 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PRAMEF1O95521 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF1O95521 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.18■□□□□ 0.5
PRAMEF1O95521 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF1O95521 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF1O95521 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF1O95521 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF1O95521 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PRAMEF1O95521 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF1O95521 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF1O95521 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF1O95521 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF1O95521 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF1O95521 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF1O95521 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.18■□□□□ 0.5
PRAMEF1O95521 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF1O95521 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.18■□□□□ 0.5
PRAMEF1O95521 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.18■□□□□ 0.5
PRAMEF1O95521 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.18■□□□□ 0.5
PRAMEF1O95521 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.18■□□□□ 0.5
PRAMEF1O95521 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.18■□□□□ 0.5
PRAMEF1O95521 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF1O95521 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF1O95521 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF1O95521 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF1O95521 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF1O95521 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF1O95521 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF1O95521 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.18■□□□□ 0.5
PRAMEF1O95521 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF1O95521 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PRAMEF1O95521 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PRAMEF1O95521 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF1O95521 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF1O95521 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.17■□□□□ 0.5
PRAMEF1O95521 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF1O95521 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF1O95521 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PRAMEF1O95521 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PRAMEF1O95521 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
PRAMEF1O95521 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF1O95521 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF1O95521 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF1O95521 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF1O95521 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF1O95521 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF1O95521 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF1O95521 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF1O95521 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.17■□□□□ 0.5
PRAMEF1O95521 PHGDH-209ENST00000641074 1780 ntBASIC18.17■□□□□ 0.5
PRAMEF1O95521 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF1O95521 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.16■□□□□ 0.5
PRAMEF1O95521 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF1O95521 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF1O95521 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF1O95521 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms