Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.75■□□□□ 0.43
GDF9O60383 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GDF9O60383 COX20P2-201ENST00000452636 358 ntBASIC17.75■□□□□ 0.43
GDF9O60383 ALG1L5P-201ENST00000482043 771 ntBASIC17.75■□□□□ 0.43
GDF9O60383 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.75■□□□□ 0.43
GDF9O60383 HLA-J-203ENST00000494367 1087 ntBASIC17.75■□□□□ 0.43
GDF9O60383 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.75■□□□□ 0.43
GDF9O60383 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GDF9O60383 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GDF9O60383 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
GDF9O60383 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.75■□□□□ 0.43
GDF9O60383 AC011467.4-201ENST00000594891 528 ntBASIC17.75■□□□□ 0.43
GDF9O60383 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.75■□□□□ 0.43
GDF9O60383 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.75■□□□□ 0.43
GDF9O60383 AL138831.2-201ENST00000606564 490 ntBASIC17.75■□□□□ 0.43
GDF9O60383 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GDF9O60383 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GDF9O60383 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GDF9O60383 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GDF9O60383 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GDF9O60383 IRX1P1-201ENST00000438849 1838 ntBASIC17.75■□□□□ 0.43
GDF9O60383 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.74■□□□□ 0.43
GDF9O60383 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDF9O60383 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDF9O60383 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDF9O60383 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDF9O60383 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
GDF9O60383 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GDF9O60383 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDF9O60383 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.74■□□□□ 0.43
GDF9O60383 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.74■□□□□ 0.43
GDF9O60383 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.74■□□□□ 0.43
GDF9O60383 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
GDF9O60383 KRT18P2-201ENST00000447938 1258 ntBASIC17.74■□□□□ 0.43
GDF9O60383 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.74■□□□□ 0.43
GDF9O60383 YBX1P5-201ENST00000509441 847 ntBASIC17.74■□□□□ 0.43
GDF9O60383 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.74■□□□□ 0.43
GDF9O60383 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.74■□□□□ 0.43
GDF9O60383 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.74■□□□□ 0.43
GDF9O60383 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GDF9O60383 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDF9O60383 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
GDF9O60383 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.74■□□□□ 0.43
GDF9O60383 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GDF9O60383 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDF9O60383 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDF9O60383 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDF9O60383 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDF9O60383 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDF9O60383 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.74■□□□□ 0.43
GDF9O60383 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.73■□□□□ 0.43
GDF9O60383 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GDF9O60383 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.73■□□□□ 0.43
GDF9O60383 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.73■□□□□ 0.43
GDF9O60383 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GDF9O60383 KRT8P50-201ENST00000562022 1438 ntBASIC17.73■□□□□ 0.43
GDF9O60383 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
GDF9O60383 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
GDF9O60383 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GDF9O60383 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GDF9O60383 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GDF9O60383 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GDF9O60383 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
GDF9O60383 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GDF9O60383 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GDF9O60383 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.73■□□□□ 0.43
GDF9O60383 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.73■□□□□ 0.43
GDF9O60383 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
GDF9O60383 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.73■□□□□ 0.43
GDF9O60383 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GDF9O60383 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
GDF9O60383 AC254562.1-201ENST00000417586 456 ntBASIC17.73■□□□□ 0.43
GDF9O60383 MCCD1P2-201ENST00000423228 335 ntBASIC17.73■□□□□ 0.43
GDF9O60383 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
GDF9O60383 AP002472.1-201ENST00000577490 586 ntBASIC17.73■□□□□ 0.43
GDF9O60383 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.73■□□□□ 0.43
GDF9O60383 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.73■□□□□ 0.43
GDF9O60383 AL139288.1-201ENST00000623748 933 ntBASIC17.73■□□□□ 0.43
GDF9O60383 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.73■□□□□ 0.43
GDF9O60383 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GDF9O60383 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GDF9O60383 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.73■□□□□ 0.43
GDF9O60383 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GDF9O60383 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.73■□□□□ 0.43
GDF9O60383 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GDF9O60383 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GDF9O60383 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDF9O60383 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.72■□□□□ 0.43
GDF9O60383 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.72■□□□□ 0.43
GDF9O60383 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.72■□□□□ 0.43
GDF9O60383 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.72■□□□□ 0.43
GDF9O60383 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDF9O60383 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDF9O60383 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.72■□□□□ 0.43
GDF9O60383 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GDF9O60383 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDF9O60383 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.72■□□□□ 0.43
GDF9O60383 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.72■□□□□ 0.43
GDF9O60383 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.72■□□□□ 0.43
GDF9O60383 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms