Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PRICKLE3O43900 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRICKLE3O43900 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.53■□□□□ 0.4
PRICKLE3O43900 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.53■□□□□ 0.4
PRICKLE3O43900 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.53■□□□□ 0.4
PRICKLE3O43900 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.53■□□□□ 0.4
PRICKLE3O43900 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PRICKLE3O43900 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.53■□□□□ 0.4
PRICKLE3O43900 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRICKLE3O43900 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PRICKLE3O43900 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRICKLE3O43900 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.53■□□□□ 0.4
PRICKLE3O43900 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PRICKLE3O43900 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRICKLE3O43900 AC135776.1-201ENST00000319817 2481 ntBASIC17.53■□□□□ 0.4
PRICKLE3O43900 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRICKLE3O43900 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRICKLE3O43900 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE3O43900 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE3O43900 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE3O43900 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PRICKLE3O43900 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE3O43900 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE3O43900 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PRICKLE3O43900 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PRICKLE3O43900 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE3O43900 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
PRICKLE3O43900 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PRICKLE3O43900 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE3O43900 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE3O43900 Z83836.1-201ENST00000624605 1642 ntBASIC17.52■□□□□ 0.4
PRICKLE3O43900 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
PRICKLE3O43900 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.52■□□□□ 0.4
PRICKLE3O43900 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.52■□□□□ 0.4
PRICKLE3O43900 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE3O43900 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.52■□□□□ 0.4
PRICKLE3O43900 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE3O43900 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.52■□□□□ 0.4
PRICKLE3O43900 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PRICKLE3O43900 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.52■□□□□ 0.4
PRICKLE3O43900 AC004263.2-201ENST00000617183 678 ntBASIC17.52■□□□□ 0.4
PRICKLE3O43900 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PRICKLE3O43900 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE3O43900 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PRICKLE3O43900 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PRICKLE3O43900 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PRICKLE3O43900 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PRICKLE3O43900 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.52■□□□□ 0.39
PRICKLE3O43900 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
PRICKLE3O43900 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE3O43900 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PRICKLE3O43900 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE3O43900 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE3O43900 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE3O43900 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE3O43900 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE3O43900 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.51■□□□□ 0.39
PRICKLE3O43900 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE3O43900 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE3O43900 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.51■□□□□ 0.39
PRICKLE3O43900 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE3O43900 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE3O43900 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
PRICKLE3O43900 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE3O43900 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE3O43900 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.51■□□□□ 0.39
PRICKLE3O43900 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.51■□□□□ 0.39
PRICKLE3O43900 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.51■□□□□ 0.39
PRICKLE3O43900 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE3O43900 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.51■□□□□ 0.39
PRICKLE3O43900 LINC00167-201ENST00000530583 1419 ntBASIC17.51■□□□□ 0.39
PRICKLE3O43900 KRT8P26-201ENST00000534154 1276 ntBASIC17.51■□□□□ 0.39
PRICKLE3O43900 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.51■□□□□ 0.39
PRICKLE3O43900 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.51■□□□□ 0.39
PRICKLE3O43900 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.51■□□□□ 0.39
PRICKLE3O43900 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE3O43900 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PRICKLE3O43900 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE3O43900 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.51■□□□□ 0.39
PRICKLE3O43900 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.51■□□□□ 0.39
PRICKLE3O43900 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE3O43900 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE3O43900 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE3O43900 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE3O43900 AL353692.3-201ENST00000407031 1396 ntBASIC17.51■□□□□ 0.39
PRICKLE3O43900 AC016734.2-201ENST00000624325 1377 ntBASIC17.51■□□□□ 0.39
PRICKLE3O43900 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE3O43900 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.51■□□□□ 0.39
PRICKLE3O43900 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE3O43900 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE3O43900 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE3O43900 AC093010.1-201ENST00000473625 1624 ntBASIC17.5■□□□□ 0.39
PRICKLE3O43900 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRICKLE3O43900 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PRICKLE3O43900 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRICKLE3O43900 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.5■□□□□ 0.39
PRICKLE3O43900 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRICKLE3O43900 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRICKLE3O43900 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRICKLE3O43900 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms