Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXS1O43638 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXS1O43638 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXS1O43638 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXS1O43638 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXS1O43638 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.17■□□□□ 0.34
FOXS1O43638 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXS1O43638 HCG4P8-203ENST00000443049 980 ntBASIC17.17■□□□□ 0.34
FOXS1O43638 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.17■□□□□ 0.34
FOXS1O43638 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXS1O43638 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXS1O43638 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.17■□□□□ 0.34
FOXS1O43638 IGHV3-41-201ENST00000613121 348 ntBASIC17.17■□□□□ 0.34
FOXS1O43638 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXS1O43638 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXS1O43638 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXS1O43638 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXS1O43638 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.17■□□□□ 0.34
FOXS1O43638 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXS1O43638 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXS1O43638 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXS1O43638 KRT18P1-202ENST00000452408 1331 ntBASIC17.17■□□□□ 0.34
FOXS1O43638 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXS1O43638 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXS1O43638 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXS1O43638 AC090164.3-201ENST00000610780 2143 ntBASIC17.17■□□□□ 0.34
FOXS1O43638 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXS1O43638 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.17■□□□□ 0.34
FOXS1O43638 AC104581.1-202ENST00000635932 2618 ntBASIC17.17■□□□□ 0.34
FOXS1O43638 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXS1O43638 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXS1O43638 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
FOXS1O43638 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXS1O43638 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXS1O43638 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXS1O43638 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.16■□□□□ 0.34
FOXS1O43638 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
FOXS1O43638 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXS1O43638 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.16■□□□□ 0.34
FOXS1O43638 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.16■□□□□ 0.34
FOXS1O43638 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.16■□□□□ 0.34
FOXS1O43638 GUSBP12-201ENST00000513727 720 ntBASIC17.16■□□□□ 0.34
FOXS1O43638 TPSP2-201ENST00000561760 610 ntBASIC17.16■□□□□ 0.34
FOXS1O43638 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
FOXS1O43638 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.16■□□□□ 0.34
FOXS1O43638 AC092329.2-201ENST00000598402 547 ntBASIC17.16■□□□□ 0.34
FOXS1O43638 AL592071.1-201ENST00000611956 408 ntBASIC17.16■□□□□ 0.34
FOXS1O43638 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
FOXS1O43638 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
FOXS1O43638 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.16■□□□□ 0.34
FOXS1O43638 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FOXS1O43638 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXS1O43638 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
FOXS1O43638 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXS1O43638 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXS1O43638 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
FOXS1O43638 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FOXS1O43638 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FOXS1O43638 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
FOXS1O43638 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.16■□□□□ 0.34
FOXS1O43638 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.16■□□□□ 0.34
FOXS1O43638 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXS1O43638 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
FOXS1O43638 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXS1O43638 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.15■□□□□ 0.34
FOXS1O43638 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.15■□□□□ 0.34
FOXS1O43638 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FOXS1O43638 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.15■□□□□ 0.34
FOXS1O43638 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.15■□□□□ 0.34
FOXS1O43638 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.15■□□□□ 0.34
FOXS1O43638 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXS1O43638 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
FOXS1O43638 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXS1O43638 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXS1O43638 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXS1O43638 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.15■□□□□ 0.34
FOXS1O43638 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.15■□□□□ 0.34
FOXS1O43638 DRAXINP1-201ENST00000437611 948 ntBASIC17.15■□□□□ 0.34
FOXS1O43638 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXS1O43638 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.15■□□□□ 0.34
FOXS1O43638 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
FOXS1O43638 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
FOXS1O43638 AC124864.1-201ENST00000623408 392 ntBASIC17.15■□□□□ 0.34
FOXS1O43638 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXS1O43638 AC093677.2-201ENST00000600169 1863 ntBASIC17.15■□□□□ 0.34
FOXS1O43638 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FOXS1O43638 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
FOXS1O43638 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.15■□□□□ 0.34
FOXS1O43638 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXS1O43638 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXS1O43638 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXS1O43638 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXS1O43638 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FOXS1O43638 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXS1O43638 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXS1O43638 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FOXS1O43638 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
FOXS1O43638 AC132938.6-201ENST00000623828 1655 ntBASIC17.14■□□□□ 0.33
FOXS1O43638 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FOXS1O43638 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms