Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
PHF1O43189 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PHF1O43189 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PHF1O43189 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.82■□□□□ 0.12
PHF1O43189 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PHF1O43189 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.82■□□□□ 0.12
PHF1O43189 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 LTB4R2-202ENST00000528054 3092 ntBASIC15.82■□□□□ 0.12
PHF1O43189 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PHF1O43189 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
PHF1O43189 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.82■□□□□ 0.12
PHF1O43189 PRSS44-201ENST00000515154 1146 ntBASIC15.82■□□□□ 0.12
PHF1O43189 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.82■□□□□ 0.12
PHF1O43189 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
PHF1O43189 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.82■□□□□ 0.12
PHF1O43189 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PHF1O43189 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.82■□□□□ 0.12
PHF1O43189 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.82■□□□□ 0.12
PHF1O43189 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.82■□□□□ 0.12
PHF1O43189 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
PHF1O43189 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.82■□□□□ 0.12
PHF1O43189 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.82■□□□□ 0.12
PHF1O43189 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PHF1O43189 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PHF1O43189 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.82■□□□□ 0.12
PHF1O43189 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PHF1O43189 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHF1O43189 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PHF1O43189 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHF1O43189 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHF1O43189 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHF1O43189 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHF1O43189 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHF1O43189 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHF1O43189 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHF1O43189 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHF1O43189 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHF1O43189 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PHF1O43189 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.81■□□□□ 0.12
PHF1O43189 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.81■□□□□ 0.12
PHF1O43189 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PHF1O43189 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHF1O43189 AC007663.1-201ENST00000438948 1240 ntBASIC15.81■□□□□ 0.12
PHF1O43189 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.81■□□□□ 0.12
PHF1O43189 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.81■□□□□ 0.12
PHF1O43189 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.81■□□□□ 0.12
PHF1O43189 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.81■□□□□ 0.12
PHF1O43189 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.81■□□□□ 0.12
PHF1O43189 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PHF1O43189 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.81■□□□□ 0.12
PHF1O43189 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.81■□□□□ 0.12
PHF1O43189 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.81■□□□□ 0.12
PHF1O43189 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PHF1O43189 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PHF1O43189 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHF1O43189 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHF1O43189 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHF1O43189 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.8■□□□□ 0.12
PHF1O43189 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHF1O43189 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
PHF1O43189 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.8■□□□□ 0.12
PHF1O43189 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHF1O43189 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHF1O43189 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.8■□□□□ 0.12
PHF1O43189 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHF1O43189 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHF1O43189 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.8■□□□□ 0.12
PHF1O43189 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.8■□□□□ 0.12
PHF1O43189 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.8■□□□□ 0.12
PHF1O43189 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHF1O43189 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHF1O43189 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHF1O43189 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHF1O43189 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PHF1O43189 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.8■□□□□ 0.12
PHF1O43189 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PHF1O43189 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms