Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHGDHO43175 TSPY7P-201ENST00000431358 1114 ntBASIC18.22■□□□□ 0.51
PHGDHO43175 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHGDHO43175 RBM17P1-201ENST00000453646 1190 ntBASIC18.22■□□□□ 0.51
PHGDHO43175 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.22■□□□□ 0.51
PHGDHO43175 AP003041.3-201ENST00000527151 707 ntBASIC18.22■□□□□ 0.51
PHGDHO43175 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.22■□□□□ 0.51
PHGDHO43175 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.22■□□□□ 0.51
PHGDHO43175 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.22■□□□□ 0.51
PHGDHO43175 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.22■□□□□ 0.51
PHGDHO43175 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PHGDHO43175 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHGDHO43175 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHGDHO43175 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHGDHO43175 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PHGDHO43175 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHGDHO43175 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.22■□□□□ 0.51
PHGDHO43175 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHGDHO43175 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.22■□□□□ 0.51
PHGDHO43175 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHGDHO43175 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PHGDHO43175 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PHGDHO43175 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PHGDHO43175 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PHGDHO43175 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.21■□□□□ 0.51
PHGDHO43175 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
PHGDHO43175 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PHGDHO43175 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PHGDHO43175 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.21■□□□□ 0.51
PHGDHO43175 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PHGDHO43175 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PHGDHO43175 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PHGDHO43175 AL390955.1-201ENST00000428694 934 ntBASIC18.21■□□□□ 0.51
PHGDHO43175 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.21■□□□□ 0.51
PHGDHO43175 AL023803.3-201ENST00000615559 522 ntBASIC18.21■□□□□ 0.51
PHGDHO43175 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.21■□□□□ 0.51
PHGDHO43175 AL163051.1-201ENST00000569214 1512 ntBASIC18.21■□□□□ 0.51
PHGDHO43175 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.21■□□□□ 0.51
PHGDHO43175 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PHGDHO43175 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PHGDHO43175 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PHGDHO43175 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.21■□□□□ 0.51
PHGDHO43175 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PHGDHO43175 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PHGDHO43175 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PHGDHO43175 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PHGDHO43175 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.21■□□□□ 0.51
PHGDHO43175 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PHGDHO43175 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PHGDHO43175 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
PHGDHO43175 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
PHGDHO43175 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PHGDHO43175 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.2■□□□□ 0.5
PHGDHO43175 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.2■□□□□ 0.5
PHGDHO43175 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PHGDHO43175 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PHGDHO43175 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.2■□□□□ 0.5
PHGDHO43175 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PHGDHO43175 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.2■□□□□ 0.5
PHGDHO43175 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PHGDHO43175 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.2■□□□□ 0.5
PHGDHO43175 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PHGDHO43175 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.2■□□□□ 0.5
PHGDHO43175 AP000525.1-201ENST00000608286 694 ntBASIC18.2■□□□□ 0.5
PHGDHO43175 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PHGDHO43175 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PHGDHO43175 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PHGDHO43175 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
PHGDHO43175 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.2■□□□□ 0.5
PHGDHO43175 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PHGDHO43175 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PHGDHO43175 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PHGDHO43175 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PHGDHO43175 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PHGDHO43175 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PHGDHO43175 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PHGDHO43175 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PHGDHO43175 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PHGDHO43175 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PHGDHO43175 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PHGDHO43175 FLJ13224-201ENST00000313737 1514 ntBASIC18.19■□□□□ 0.5
PHGDHO43175 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.19■□□□□ 0.5
PHGDHO43175 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PHGDHO43175 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PHGDHO43175 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PHGDHO43175 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PHGDHO43175 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.19■□□□□ 0.5
PHGDHO43175 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.19■□□□□ 0.5
PHGDHO43175 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.19■□□□□ 0.5
PHGDHO43175 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
PHGDHO43175 KRT18P23-201ENST00000435622 1283 ntBASIC18.19■□□□□ 0.5
PHGDHO43175 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.19■□□□□ 0.5
PHGDHO43175 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.19■□□□□ 0.5
PHGDHO43175 AC008550.1-201ENST00000511500 884 ntBASIC18.19■□□□□ 0.5
PHGDHO43175 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.19■□□□□ 0.5
PHGDHO43175 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PHGDHO43175 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.19■□□□□ 0.5
PHGDHO43175 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.19■□□□□ 0.5
PHGDHO43175 CR769767.2-201ENST00000622735 460 ntBASIC18.19■□□□□ 0.5
PHGDHO43175 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms