Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RRP8O43159 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RRP8O43159 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RRP8O43159 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RRP8O43159 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RRP8O43159 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RRP8O43159 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RRP8O43159 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RRP8O43159 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.15■□□□□ 0.34
RRP8O43159 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RRP8O43159 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.15■□□□□ 0.34
RRP8O43159 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RRP8O43159 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RRP8O43159 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
RRP8O43159 RPS2P1-201ENST00000434010 821 ntBASIC17.15■□□□□ 0.34
RRP8O43159 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.15■□□□□ 0.34
RRP8O43159 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.15■□□□□ 0.34
RRP8O43159 RNA5SP415-201ENST00000517246 115 ntBASIC17.15■□□□□ 0.34
RRP8O43159 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.15■□□□□ 0.34
RRP8O43159 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.15■□□□□ 0.34
RRP8O43159 AC021087.4-201ENST00000563761 564 ntBASIC17.15■□□□□ 0.34
RRP8O43159 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.15■□□□□ 0.34
RRP8O43159 AP001269.4-201ENST00000609611 512 ntBASIC17.15■□□□□ 0.34
RRP8O43159 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RRP8O43159 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RRP8O43159 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RRP8O43159 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
RRP8O43159 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RRP8O43159 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RRP8O43159 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RRP8O43159 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RRP8O43159 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RRP8O43159 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RRP8O43159 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RRP8O43159 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RRP8O43159 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RRP8O43159 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RRP8O43159 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.14■□□□□ 0.34
RRP8O43159 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RRP8O43159 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.14■□□□□ 0.34
RRP8O43159 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RRP8O43159 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
RRP8O43159 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RRP8O43159 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RRP8O43159 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.14■□□□□ 0.33
RRP8O43159 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RRP8O43159 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.14■□□□□ 0.33
RRP8O43159 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RRP8O43159 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RRP8O43159 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RRP8O43159 AC004832.2-201ENST00000426397 482 ntBASIC17.14■□□□□ 0.33
RRP8O43159 HTR5BP-201ENST00000430851 1154 ntBASIC17.14■□□□□ 0.33
RRP8O43159 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RRP8O43159 DNAJB3-202ENST00000449667 1266 ntBASIC17.14■□□□□ 0.33
RRP8O43159 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.14■□□□□ 0.33
RRP8O43159 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.14■□□□□ 0.33
RRP8O43159 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.14■□□□□ 0.33
RRP8O43159 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.14■□□□□ 0.33
RRP8O43159 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.14■□□□□ 0.33
RRP8O43159 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.14■□□□□ 0.33
RRP8O43159 MTDHP5-201ENST00000598980 586 ntBASIC17.14■□□□□ 0.33
RRP8O43159 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RRP8O43159 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RRP8O43159 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RRP8O43159 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RRP8O43159 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RRP8O43159 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RRP8O43159 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RRP8O43159 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RRP8O43159 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.14■□□□□ 0.33
RRP8O43159 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RRP8O43159 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RRP8O43159 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.13■□□□□ 0.33
RRP8O43159 AC112777.1-201ENST00000540175 1423 ntBASIC17.13■□□□□ 0.33
RRP8O43159 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RRP8O43159 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RRP8O43159 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RRP8O43159 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RRP8O43159 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RRP8O43159 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.13■□□□□ 0.33
RRP8O43159 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RRP8O43159 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RRP8O43159 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.13■□□□□ 0.33
RRP8O43159 AC211486.1-202ENST00000416371 468 ntBASIC17.13■□□□□ 0.33
RRP8O43159 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RRP8O43159 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.13■□□□□ 0.33
RRP8O43159 AC211476.1-201ENST00000503899 468 ntBASIC17.13■□□□□ 0.33
RRP8O43159 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
RRP8O43159 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.13■□□□□ 0.33
RRP8O43159 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.13■□□□□ 0.33
RRP8O43159 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.13■□□□□ 0.33
RRP8O43159 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.13■□□□□ 0.33
RRP8O43159 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RRP8O43159 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RRP8O43159 KRT18P28-201ENST00000453838 1332 ntBASIC17.13■□□□□ 0.33
RRP8O43159 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RRP8O43159 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RRP8O43159 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
RRP8O43159 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.13■□□□□ 0.33
RRP8O43159 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms